RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SGCBQ16585 318 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 TMEM270Q6UE05 265 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 B3GLCTQ6Y288 498 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 LCA5Q86VQ0 697 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 STHQ8IWL8 128 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 ZBED8Q8IZ13 594 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF491Q8N8L2 437 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 ZBED6CLQ96FA7 236 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 MYCBPQ99417 103 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 TTYH2Q9BSA4 534 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 DDX28Q9NUL7 540 aaKnown RBP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 SEC14L4Q9UDX3 406 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 MLXQ9UH92 298 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 ADAMTS9Q9P2N4 1935 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF318Q5VUA4 2279 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TRIM64A6NGJ6 449 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TRIM64BA6NI03 449 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 CHEK1O14757 476 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF253O75346 499 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 GEMP55040 296 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ABRAXAS2Q15018 415 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TRADDQ15628 312 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 SHROOM1Q2M3G4 852 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF674Q2M3X9 581 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 CNPY1Q3B7I2 92 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TIMM50Q3ZCQ8 353 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 UNC50Q53HI1 259 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ODF2Q5BJF6 829 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 RTL6Q6ICC9 239 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF713Q8N859 430 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-205ENST00000464541 MSANTD4Q8NCY6 345 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 RDH11Q8TC12 318 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 MRAPQ8TCY5 172 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TBCKQ8TEA7 893 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 RPGRIP1Q96KN7 1286 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF446Q9NWS9 450 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 VPS54Q9P1Q0 977 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 ARMCX1Q9P291 453 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TUBGCP4Q9UGJ1 667 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 DIMT1Q9UNQ2 313 aaKnown RBP4.45□□□□□ -1.7
PTCD3-205ENST00000464541 RNF24Q9Y225 148 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 VSIG4Q9Y279 399 aa4.45□□□□□ -1.7
PTCD3-205ENST00000464541 TRAV9-2A0A087WT02 112 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 A0A1W2PQ72 361 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 SLC28A1O00337 649 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 DNAH10OSP0CZ25 163 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 P4HA1P13674 534 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 ATP6V1E1P36543 226 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 ZNF131P52739 623 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 NDST1P52848 882 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 HMGCS2P54868 508 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CRMP1Q14194 572 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 C14orf28Q4W4Y0 310 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 SLC39A12Q504Y0 691 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CCBE1Q6UXH8 406 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-205ENST00000464541 MOB2Q70IA6 237 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CCDC91Q7Z6B0 441 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 IQCA1Q86XH1 822 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CCDC170Q8IYT3 715 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 SLC22A18ASQ8N1D0 253 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CCDC47Q96A33 483 aaKnown RBP4.44□□□□□ -1.7
PTCD3-205ENST00000464541 TBC1D31Q96DN5 1066 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 C5orf30Q96GV9 206 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 SERAC1Q96JX3 654 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 CXorf58Q96LI9 332 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 FAM213AQ9BRX8 229 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 IL1RL2Q9HB29 575 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 SLC25A19Q9HC21 320 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 ABCD2Q9UBJ2 740 aa4.44□□□□□ -1.7
PTCD3-205ENST00000464541 IGHV3OR16-12A0A075B7B8 117 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 SMIM30A4D0T7 59 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 LRRTM2O43300 516 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 ATP6V1B1P15313 513 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 NME5P56597 212 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 PRR30Q53SZ7 412 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-205ENST00000464541 KLHL30-AS1Q8NEE0 82 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 PRAM1Q96QH2 718 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 MCCC1Q96RQ3 725 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-205ENST00000464541 FUNDC2Q9BWH2 189 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 TMEM245Q9H330 911 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 DCLRE1BQ9H816 532 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 ZCCHC3Q9NUD5 404 aaKnown RBP4.43□□□□□ -1.7
PTCD3-205ENST00000464541 COMMD8Q9NX08 183 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 AFF2P51816 1311 aa4.43□□□□□ -1.7
PTCD3-205ENST00000464541 A0A0A6YYD4 124 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 A0A1W2PRV1 198 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 ZSCAN5CA6NGD5 496 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-205ENST00000464541 ARPC1BO15143 372 aaKnown RBP4.42□□□□□ -1.7
PTCD3-205ENST00000464541 NUDT14O95848 222 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 SMSP52788 366 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 MARC1Q5VT66 337 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 CDC42EP5Q6NZY7 148 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 ASRGL1Q7L266 308 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 UNC45BQ8IWX7 931 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms