RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 WDR75Q8IWA0 830 aaKnown RBP15.83■□□□□ 0.12
VPS52-215ENST00000464425 GRHL3Q8TE85 626 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 PELOQ9BRX2 385 aaKnown RBP15.83■□□□□ 0.12
VPS52-215ENST00000464425 FAIM2Q9BWQ8 316 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 HES7Q9BYE0 225 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 KLHL1Q9NR64 748 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 LRFN1Q9P244 771 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 HEY2Q9UBP5 337 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 COPS7AQ9UBW8 275 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 CES1P1Q9UKY3 287 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 VPS4AQ9UN37 437 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 DLGAP4Q9Y2H0 992 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 TMEM200CA6NKL6 621 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 TCP11X1B4DZS4 312 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 WWP2O00308 870 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 ZNF195O14628 629 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 EDF1O60869 148 aaKnown RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 ITGA10O75578 1167 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 ERAL1O75616 437 aaKnown RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 OR2J2O76002 312 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 TGDSO95455 350 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 IL3P08700 152 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 ANXA4P09525 319 aaPredicted RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 KITP10721 976 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 FEN1P39748 380 aaKnown RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 CYB561P49447 251 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 ERVK-8P63133 956 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 RNF4P78317 190 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 SRSF11Q05519 484 aaKnown RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 ATP6AP1LQ52LC2 224 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 NOXRED1Q6NXP6 359 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 SLC48A1Q6P1K1 146 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 ARMC10Q8N2F6 343 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 C16orf78Q8WTQ4 265 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 FCRL1Q96LA6 429 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 NUF2Q9BZD4 464 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 MARCOQ9UEW3 520 aaPredicted RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 ERVK-19Q9WJR5 959 aa15.82■□□□□ 0.12
VPS52-215ENST00000464425 WBP11Q9Y2W2 641 aaKnown RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 POLR3HQ9Y535 204 aaPredicted RBP15.82■□□□□ 0.12
VPS52-215ENST00000464425 ATP6AP2A0A1C7CYW4 349 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 ATP6AP2O75787 350 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 NEURL1O76050 574 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 IGKV3-11P04433 115 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 CPMP14384 443 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 CD46P15529 392 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 NT5EP21589 574 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 GNLYP22749 145 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 UQCRFS1P47985 274 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 HLCSP50747 726 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 RFTN2Q52LD8 501 aaPredicted RBP15.81■□□□□ 0.12
VPS52-215ENST00000464425 C6orf136Q5SQH8 315 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 RPUSD3Q6P087 351 aaKnown RBP15.81■□□□□ 0.12
VPS52-215ENST00000464425 FAM47EQ6ZV65 393 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 TMEM156Q8N614 296 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 CDC26Q8NHZ8 85 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 KLHL29Q96CT2 875 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 TUBGCP3Q96CW5 907 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 FBXL20Q96IG2 436 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 ART5Q96L15 291 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 C5orf34Q96MH7 638 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 TAAR6Q96RI8 345 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 AGPAT4Q9NRZ5 378 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 MYOTQ9UBF9 498 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 PSME2Q9UL46 239 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 YARS2Q9Y2Z4 477 aaKnown RBP15.81■□□□□ 0.12
VPS52-215ENST00000464425 SHANK1Q9Y566 2161 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 USH1CQ9Y6N9 552 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 BAHCC1Q9P281 2608 aa15.81■□□□□ 0.12
VPS52-215ENST00000464425 PEX11AO75192 247 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 RASAL1O95294 804 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 PORP16435 677 aaPredicted RBP15.8■□□□□ 0.12
VPS52-215ENST00000464425 CSNK2A2P19784 350 aaPredicted RBP15.8■□□□□ 0.12
VPS52-215ENST00000464425 TRHRP34981 398 aaPredicted RBP15.8■□□□□ 0.12
VPS52-215ENST00000464425 PTGER1P34995 402 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 EMX2Q04743 252 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 MAD2L1Q13257 205 aaPredicted RBP15.8■□□□□ 0.12
VPS52-215ENST00000464425 MAPKAPK3Q16644 382 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 SPRED3Q2MJR0 410 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 GALNTL6Q49A17 601 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 EPGNQ6UW88 154 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 FAM180AQ6UWF9 173 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 LARP4Q71RC2 724 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS52-215ENST00000464425 HORMAD2Q8N7B1 307 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 GALNT11Q8NCW6 608 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 OR5L2Q8NGL0 311 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 OR8K3Q8NH51 312 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 MAELQ96JY0 434 aaKnown RBP15.8■□□□□ 0.12
VPS52-215ENST00000464425 CLMPQ9H6B4 373 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 AKTIPQ9H8T0 292 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 CXorf21Q9HAI6 301 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 UTS2RQ9UKP6 389 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 ZNF780BQ9Y6R6 833 aa15.8■□□□□ 0.12
VPS52-215ENST00000464425 CROCCQ5TZA2 2017 aa15.79■□□□□ 0.12
VPS52-215ENST00000464425 SDHDO14521 159 aa15.79■□□□□ 0.12
VPS52-215ENST00000464425 SLC25A12O75746 678 aa15.79■□□□□ 0.12
VPS52-215ENST00000464425 ZIC2O95409 532 aaPredicted RBP15.79■□□□□ 0.12
VPS52-215ENST00000464425 SP1P08047 785 aa15.79■□□□□ 0.12
VPS52-215ENST00000464425 CT62P0C5K7 136 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms