RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NDUFA13Q9P0J0 144 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 KLK4Q9Y5K2 254 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 OR5K4A6NMS3 321 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 ADAMDEC1O15204 470 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 DNAJB5O75953 348 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 CHRM4P08173 479 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 CPN2P22792 545 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 EEF1B2P24534 225 aaKnown RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 CD27P26842 260 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 SOX18P35713 384 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 GSSP48637 474 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 TNFRSF17Q02223 184 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 TMEM64Q6YI46 380 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 KCTD8Q6ZWB6 473 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 RNF44Q7L0R7 432 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 SLC30A8Q8IWU4 369 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 NCSTNQ92542 709 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 ELP4Q96EB1 424 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 ZNF347Q96SE7 839 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 PIP5K1AQ99755 562 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 QRSL1Q9H0R6 528 aaKnown RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 MIR1-1HGQ9H1L0 117 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 FBXL21Q9UKT6 434 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 DAPP1Q9UN19 280 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 ENTPD2Q9Y5L3 495 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 ENPP4Q9Y6X5 453 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 XPNPEP2O43895 674 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 NDUFS2O75306 463 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 CD38P28907 300 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 PCSK6P29122 969 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 MPIP34949 423 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 LIMS1P48059 325 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 VSX2P58304 361 aaPredicted RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 IL5RAQ01344 420 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 SUZ12Q15022 739 aaKnown RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 LEXMQ3ZCV2 418 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 FAM111BQ6SJ93 734 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 LGI4Q8N135 537 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 OR10G2Q8NGC3 310 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 VANGL1Q8TAA9 524 aaPredicted RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 FBLIM1Q8WUP2 373 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 SERINC2Q96SA4 455 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 POLR1BQ9H9Y6 1135 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 SEMA3GQ9NS98 782 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 P2RX2Q9UBL9 471 aa12.06□□□□□ -0.48
VAPB-203ENST00000463370 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
VAPB-203ENST00000463370 SCN3AQ9NY46 2000 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 FAM221BA6H8Z2 402 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 EPPINO95925 133 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 CSF2P04141 144 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 IFNW1P05000 195 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 NR2F1P10589 423 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 ALOX12P18054 663 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 RYKP34925 604 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 BLKP51451 505 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 STARD6P59095 220 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 RPL6Q02878 288 aaKnown RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 NPRL3Q12980 569 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 NEDD8Q15843 81 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 CAMKVQ8NCB2 501 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 OR7G2Q8NG99 324 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 LMX1AQ8TE12 382 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 HDAC2Q92769 488 aaKnown RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 RERGQ96A58 199 aaPredicted RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 YTHDF1Q9BYJ9 559 aaKnown RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 LIN28AQ9H9Z2 209 aaKnown RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 GMPPBQ9Y5P6 360 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 ZNF780BQ9Y6R6 833 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 E9PQ18 207 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 SLC1A7O00341 560 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 B3GALT2O43825 422 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 FHP07954 510 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 POU2F1P14859 743 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 FMO3P31513 532 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 SLC5A2P31639 672 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 BUD31P41223 144 aaPredicted RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 KCNJ5P48544 419 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 MAN2A2P49641 1150 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 XKP51811 444 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 SMN1Q16637 294 aaKnown RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 MICAQ29983 383 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 TCTN3Q6NUS6 607 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 BORAQ6PGQ7 559 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 ZNF773Q6PK81 442 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 TSPYL5Q86VY4 417 aaPredicted RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 OOSP2Q86WS3 158 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 CSNK1A1LQ8N752 337 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 NUP43Q8NFH3 380 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms