RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 GDF1P27539 372 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 ADSLP30566 484 aaPredicted RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 HNMTP50135 292 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 MAGOHP61326 146 aaKnown RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 DCAF7P61962 342 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 SERTAD2Q14140 314 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 FASTKD3Q14CZ7 662 aaKnown RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 OR4D1Q15615 310 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 FRA10AC1Q70Z53 315 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 C9orf106Q8NAJ2 232 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 BCAS4Q8TDM0 211 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 ZNF473Q8WTR7 871 aaKnown RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 TLCD1Q96CP7 247 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 WDR34Q96EX3 536 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 GAL3ST4Q96RP7 486 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 CAB39LQ9H9S4 337 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 SMYD2Q9NRG4 433 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 DNAJC11Q9NVH1 559 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 JKAMPQ9P055 326 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 COPS7AQ9UBW8 275 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 CORO1CQ9ULV4 474 aaPredicted RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 BOKQ9UMX3 212 aaPredicted RBP14.36□□□□□ -0.11
SND1-203ENST00000463020 PCDHGB3Q9Y5G1 929 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 NINQ8N4C6 2090 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 CUBNO60494 3623 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 A0A088AWK7 358 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 TLDC2A0PJX2 215 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 FAM47E-STBD1D6RA91 191 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 SCELO95171 688 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 ACSL3O95573 720 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 C1QAP02745 245 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 HEXAP06865 529 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 ZNF10P21506 573 aaPredicted RBP14.35□□□□□ -0.11
SND1-203ENST00000463020 HIST1H1TP22492 207 aaPredicted RBP14.35□□□□□ -0.11
SND1-203ENST00000463020 LSP1P33241 339 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 TIMP3P35625 211 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 MSH2P43246 934 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 KCNC1P48547 511 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 FBXW4P57775 412 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 HERVK_113P63132 956 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 ERVK-8P63133 956 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 FOXF2Q12947 444 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.115e-9■■■■■ 30.6
SND1-203ENST00000463020 EIPR1Q53HC9 387 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 FBXW10Q5XX13 1052 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 TAOK1Q7L7X3 1001 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 LACC1Q8IV20 430 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 LIX1Q8N485 282 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 NKAPQ8N5F7 415 aaKnown RBP14.35□□□□□ -0.11
SND1-203ENST00000463020 SNX31Q8N9S9 440 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 SLC22A8Q8TCC7 542 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 DGAT2Q96PD7 388 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 KCNC2Q96PR1 638 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 TRIB1Q96RU8 372 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 DOHHQ9BU89 302 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 ERVK-6Q9BXR3 956 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 WWTR1Q9GZV5 400 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 PRDM14Q9GZV8 571 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 UBQLN3Q9H347 655 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 CDC42EP4Q9H3Q1 356 aaKnown RBP14.35□□□□□ -0.11
SND1-203ENST00000463020 EHD1Q9H4M9 534 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 WWOXQ9NZC7 414 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 GPRC5BQ9NZH0 403 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 ZNF629Q9UEG4 869 aaPredicted RBP14.35□□□□□ -0.11
SND1-203ENST00000463020 ERVK-19Q9WJR5 959 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 TEX264Q9Y6I9 313 aa14.35□□□□□ -0.11
SND1-203ENST00000463020 AHRRA9YTQ3 701 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 EEF1E1-BLOC1S5C9J1V9 151 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 EBAG9O00559 213 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 CLGNO14967 610 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 TP73O15350 636 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 EEF1E1O43324 174 aaKnown RBP14.34□□□□□ -0.11
SND1-203ENST00000463020 TGFB1P01137 390 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 SHBGP04278 402 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 CPN2P22792 545 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 GSTM2P28161 218 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 GGT5P36269 586 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 SLC37A1P57057 533 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 NKX6-1P78426 367 aaPredicted RBP14.34□□□□□ -0.11
SND1-203ENST00000463020 EBPQ15125 230 aaKnown RBP14.34□□□□□ -0.11
SND1-203ENST00000463020 NSUN5P2Q63ZY6 315 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 DESI1Q6ICB0 168 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 RELL1Q8IUW5 271 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 ZNF441Q8N8Z8 693 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 PTCD3Q96EY7 689 aaKnown RBP14.34□□□□□ -0.11
SND1-203ENST00000463020 WDYHV1Q96HA8 205 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 FBXL20Q96IG2 436 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 GNRHR2Q96P88 292 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 UGT2B28Q9BY64 529 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 OR51B5Q9H339 312 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 QPCTLQ9NXS2 382 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 CAMK2AQ9UQM7 478 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
SND1-203ENST00000463020 STAB1Q9NY15 2570 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 ATRQ13535 2644 aa14.34□□□□□ -0.11
SND1-203ENST00000463020 GLOD5A6NK44 160 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms