RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 GTF2H2CQ6P1K8 395 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 ADGRD1Q6QNK2 874 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 LACC1Q8IV20 430 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 GALNT12Q8IXK2 581 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 TP53INP1Q96A56 240 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 HSPBAP1Q96EW2 488 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 RMND5BQ96G75 393 aaPredicted RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 SERPINI1Q99574 410 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 FOXC2Q99958 501 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 CLEC4MQ9H2X3 399 aaPredicted RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 DDX31Q9H8H2 851 aaKnown RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 IPPKQ9H8X2 491 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 PSD3Q9NYI0 1048 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 AHSPQ9NZD4 102 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 CPSF2Q9P2I0 782 aaKnown RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 FOXD3Q9UJU5 478 aaPredicted RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 CNOT11Q9UKZ1 510 aaKnown RBP14.14□□□□□ -0.15
SKA3-204ENST00000462482 ASB4Q9Y574 426 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 CSMD2Q7Z408 3487 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 C2CD3Q4AC94 2353 aa14.14□□□□□ -0.15
SKA3-204ENST00000462482 A0A0A6YYD5 115 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 A0A1W2PR48 441 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 FOXE1O00358 373 aaPredicted RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 SYT5O00445 386 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 CDH16O75309 829 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 EEDO75530 441 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 CTAG2O75638 210 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 AIFM1O95831 613 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 C2P06681 752 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 ENDOUP21128 410 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 DNASE1P24855 282 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 BSGP35613 385 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 DUSP8Q13202 625 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 UAP1Q16222 522 aaPredicted RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 MROH9Q5TGP6 573 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 TTC19Q6DKK2 380 aaPredicted RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 MRM1Q6IN84 353 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 METTL2BQ6P1Q9 378 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 PAGE2Q7Z2X7 111 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 FAM222BQ8WU58 562 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 MRRFQ96E11 262 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 SECISBP2Q96T21 854 aaKnown RBP14.13□□□□□ -0.15
SKA3-204ENST00000462482 NPFFR2Q9Y5X5 522 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 DCHS2Q6V1P9 2916 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 HIVEP1P15822 2718 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 CACNA1CQ13936 2221 aa14.13□□□□□ -0.15
SKA3-204ENST00000462482 ADGRG4Q8IZF6 3080 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 FAM221AA4D161 298 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 TMPRSS11DO60235 418 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 GUCY1B2O75343 617 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 TRIM3O75382 744 aaPredicted RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 SEMA3DO95025 777 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 CLDN9O95484 217 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 EPPINO95925 133 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 MTHFD2P13995 350 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 TYK2P29597 1187 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 PHBP35232 272 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 C2orf54Q08AI8 447 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 PCBP2Q15366 365 aaKnown RBP eCLIP14.12□□□□□ -0.15
SKA3-204ENST00000462482 ACSF3Q4G176 576 aaPredicted RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 C10orf62Q5T681 223 aaPredicted RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 GOLGA7Q7Z5G4 137 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 KIF18BQ86Y91 864 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 L3MBTL4Q8NA19 623 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 OR4K14Q8NGD5 310 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 FBXO25Q8TCJ0 367 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 NRGNQ92686 78 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 RNASE6Q93091 150 aaKnown RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 RILPQ96NA2 401 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 GPATCH1Q9BRR8 931 aaKnown RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 CXorf21Q9HAI6 301 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 RASSF1Q9NS23 344 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 CCM2LQ9NUG4 571 aaPredicted RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 ZNF629Q9UEG4 869 aaPredicted RBP14.12□□□□□ -0.15
SKA3-204ENST00000462482 CAMK2AQ9UQM7 478 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 CFL2Q9Y281 166 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 RNF11Q9Y3C5 154 aa14.12□□□□□ -0.15
SKA3-204ENST00000462482 GTF3C1Q12789 2109 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 A0A096LPK6 155 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 KLHL2O95198 593 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 NT5EP21589 574 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 SSTR4P31391 388 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 TIMP3P35625 211 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
SKA3-204ENST00000462482 SERPINB8P50452 374 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 CDK9P50750 372 aaKnown RBP14.11□□□□□ -0.15
SKA3-204ENST00000462482 NEK2P51955 445 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 CCNG1P51959 295 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 DGKQP52824 942 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 FBXW4P57775 412 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 IRF9Q00978 393 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 IFT88Q13099 833 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 FLYWCH1Q4VC44 716 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 TMEM64Q6YI46 380 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 CENPLQ8N0S6 344 aaPredicted RBP14.11□□□□□ -0.15
SKA3-204ENST00000462482 OR7G1Q8NGA0 311 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 SPPL2AQ8TCT8 520 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 TIMP4Q99727 224 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 ANGPTL4Q9BY76 406 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 OR10A5Q9H207 317 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms