RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DNASE1L1P49184 302 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 HERVK_113P63132 956 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ERVK-8P63133 956 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 IFT88Q13099 833 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SLC10A1Q14973 349 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 EBPQ15125 230 aaKnown RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 NTRK2Q16620 822 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 C3P1Q6ZMU1 363 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 FAM47EQ6ZV65 393 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ACAD11Q709F0 780 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 TRMT10CQ7L0Y3 403 aaKnown RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SLC29A4Q7RTT9 530 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 PAGE2Q7Z2X7 111 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 GDF7Q7Z4P5 450 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SRRM1Q8IYB3 904 aaKnown RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 FBXW8Q8N3Y1 598 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF615Q8N8J6 731 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 OR4F6Q8NGB9 312 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 OR4K14Q8NGD5 310 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 CA5BP1Q8WTZ4 195 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF592Q92610 1267 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 UCN3Q969E3 161 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SDCCAG3Q96C92 435 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 NTNG2Q96CW9 530 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 MTBPQ96DY7 904 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 C14orf79Q96F83 325 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 NSUN5Q96P11 429 aaKnown RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 CNPPD1Q9BV87 410 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ERVK-6Q9BXR3 956 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 TRIM8Q9BZR9 551 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 WWTR1Q9GZV5 400 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 BRF2Q9HAW0 419 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 PROK2Q9HC23 129 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ACKR4Q9NPB9 350 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SEMA4BQ9NPR2 832 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 TEX10Q9NXF1 929 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 QPCTLQ9NXS2 382 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 TUBA8Q9NY65 449 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF225Q9UK10 706 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 CES1P1Q9UKY3 287 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 ERVK-19Q9WJR5 959 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.44□□□□□ -1.06
BRCA1-207ENST00000461798 LRBAP50851 2863 aa8.44□□□□□ -1.06
BRCA1-207ENST00000461798 A0A1B0GTL3 188 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 C1orf226A1L170 272 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 A8MT66 165 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 FAM166BA8MTA8 275 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 NPIPA2E9PIF3 369 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 NPIPA3F8WFD2 350 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 G3V3Y1 287 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 PPP6CO00743 305 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 GBAP04062 536 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 KLK1P06870 262 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 HOXD4P09016 255 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CPMP14384 443 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 IGFBP2P18065 325 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 S1PR1P21453 382 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 ACVR2AP27037 513 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 PIK3R1P27986 724 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 SSTR2P30874 369 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CHRNB4P30926 498 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 HSD17B3P37058 310 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 PIGAP37287 484 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 MAGEA5P43359 124 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 XKP51811 444 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CDH13P55290 713 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TRA2BP62995 288 aaKnown RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 MGAT2Q10469 447 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 GALNT1Q10472 559 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 MAP4K2Q12851 820 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CCNYL2Q5T2Q4 361 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TTC19Q6DKK2 380 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 GALNT12Q8IXK2 581 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 IFT20Q8IY31 132 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TAGAPQ8N103 731 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 LRRC25Q8N386 305 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CEP112Q8N8E3 955 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 C17orf47Q8NEP4 570 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 OR7G1Q8NGA0 311 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 RND1Q92730 232 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 ADIPOR1Q96A54 375 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TM4SF18Q96CE8 201 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 SMC6Q96SB8 1091 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 SECISBP2Q96T21 854 aaKnown RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 MRPL1Q9BYD6 325 aaKnown RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 ELOVL6Q9H5J4 265 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 ZFP64Q9NPA5 681 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 NMRK1Q9NWW6 199 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 FETUBQ9UGM5 382 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 TRPS1Q9UHF7 1281 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 CNOT11Q9UKZ1 510 aaKnown RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 NFU1Q9UMS0 254 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 SNX6Q9UNH7 406 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 RNF6Q9Y252 685 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 PCDHGB3Q9Y5G1 929 aa8.43□□□□□ -1.06
BRCA1-207ENST00000461798 PCDHA9Q9Y5H5 950 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms