RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PRRC2CQ9Y520 2896 aaKnown RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 EML6Q6ZMW3 1958 aa13.02□□□□□ -0.32
HDLBP-229ENST00000460826 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 GABRR3A8MPY1 467 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 TBX19O60806 448 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 ATP1B1P05026 303 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 S1PR1P21453 382 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 SSTR4P31391 388 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 IDH3AP50213 366 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 AQP5P55064 265 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 MRPS35P82673 323 aaKnown RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 LSM12Q3MHD2 195 aaKnown RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 LACTB2Q53H82 288 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 NXNQ6DKJ4 435 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 RIMKLAQ8IXN7 391 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 THAP3Q8WTV1 239 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 CIDECQ96AQ7 238 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF764Q96H86 408 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 FBXL20Q96IG2 436 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 MARK4Q96L34 752 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 BBS4Q96RK4 519 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 DEFB126Q9BYW3 111 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 BRINP2Q9C0B6 783 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 CCDC134Q9H6E4 229 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 LIN28AQ9H9Z2 209 aaKnown RBP13.02□□□□□ -0.33
HDLBP-229ENST00000460826 GIMAP4Q9NUV9 329 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 AIG1Q9NVV5 245 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 ATP6V1HQ9UI12 483 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 ENTPD4Q9Y227 616 aa13.02□□□□□ -0.33
HDLBP-229ENST00000460826 EXPH5Q8NEV8 1989 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ANKRD28O15084 1053 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 PDPK1O15530 556 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 LAMP1P11279 417 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 PCSK2P16519 638 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 EFNA1P20827 205 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 HPCAL1P37235 193 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CD97P48960 835 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 NME5P56597 212 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CLDN8P56748 225 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 AP2B1P63010 937 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 FUT7Q11130 342 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 DUSP8Q13202 625 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 MFAP5Q13361 173 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 EXOSC7Q15024 291 aaKnown RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 TRMT12Q53H54 448 aaKnown RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF628Q5EBL2 1059 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CRB2Q5IJ48 1285 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CGB2Q6NT52 195 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 IGFL2Q6UWQ7 119 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ISLR2Q6UXK2 745 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 C16orf47Q6ZP98 133 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ASB18Q6ZVZ8 466 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 SPATA19Q7Z5L4 167 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 C9orf40Q8IXQ3 194 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 KAT2AQ92830 837 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 PPCDCQ96CD2 204 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CTHRC1Q96CG8 243 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 MTERF3Q96E29 417 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 AMDHD1Q96NU7 426 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CDCP1Q9H5V8 836 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ANKRA2Q9H9E1 313 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 FGFR1OP2Q9NVK5 253 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 SH3BP4Q9P0V3 963 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF639Q9UID6 485 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 G3BP2Q9UN86 482 aaKnown RBP13.01□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF451Q9Y4E5 1061 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 CSAG2Q9Y5P2 127 aa13.01□□□□□ -0.33
HDLBP-229ENST00000460826 DYRK3O43781 588 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 TGDSO95455 350 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 CBX7O95931 251 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 F10P00742 488 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 NTSP30990 170 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 NCBP2P52298 156 aaKnown RBP eCLIP13□□□□□ -0.33
HDLBP-229ENST00000460826 GYS2P54840 703 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 SLC37A1P57057 533 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 C21orf58P58505 322 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 RNF4P78317 190 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 COLEC12Q5KU26 742 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 ACER2Q5QJU3 275 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 HSDL2Q6YN16 418 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 RNF111Q6ZNA4 994 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF551Q7Z340 670 aaPredicted RBP13□□□□□ -0.33
HDLBP-229ENST00000460826 R3HCC1LQ7Z5L2 792 aaKnown RBP13□□□□□ -0.33
HDLBP-229ENST00000460826 RPS19BP1Q86WX3 136 aaKnown RBP13□□□□□ -0.33
HDLBP-229ENST00000460826 SAMD14Q8IZD0 417 aaPredicted RBP13□□□□□ -0.33
HDLBP-229ENST00000460826 FAM9CQ8IZT9 166 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms