RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SF3B1O75533 1304 aaKnown RBP eCLIP2.62□□□□□ -1.99
HPS3-203ENST00000460822 UQCRHLA0A096LP55 91 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 IGHV4-61A0A0C4DH41 118 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 SH3PXD2BA1X283 911 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 LGALS8O00214 317 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 DYNC1I1O14576 645 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CASQ2O14958 399 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 SURF6O75683 361 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 MFN2O95140 757 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 IGHV4-59P01825 116 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 UGT2B4P06133 528 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CA3P07451 260 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 UQCRHP07919 91 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 GZMAP12544 262 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CYP11B1P15538 503 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CALB2P22676 271 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TMOD1P28289 359 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PTPN6P29350 595 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 FCGR2BP31994 310 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 SLC6A8P48029 635 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 DCDC1P59894 354 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CDR2Q01850 454 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TNFRSF17Q02223 184 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 HSPA14Q0VDF9 509 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 NME3Q13232 169 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 OR1C1Q15619 314 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ANKRD55Q3KP44 614 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CFAP221Q4G0U5 840 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 WDR38Q5JTN6 314 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 C9orf57Q5W0N0 161 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 LRRC70Q7Z2Q7 622 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 C16orf82Q7Z2V1 217 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 MTERF4Q7Z6M4 381 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 YRDCQ86U90 279 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 PIGZQ86VD9 579 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 SLC22A16Q86VW1 577 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 SPATA2LQ8IUW3 424 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 WDR49Q8IV35 697 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CCDC185Q8N715 623 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ADAD2Q8NCV1 583 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 OR13A1Q8NGR1 328 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 SPATA3Q8NHX4 192 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 APOBEC4Q8WW27 367 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 MCHR2Q969V1 340 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 NCLNQ969V3 563 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 C4orf36Q96KX1 117 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CFAP53Q96M91 514 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ERGIC2Q96RQ1 377 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CCT7Q99832 543 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 MRPL13Q9BYD1 178 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 WWP1Q9H0M0 922 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 VCX2Q9H322 139 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 WDR76Q9H967 626 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 INTS9Q9NV88 658 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 FLRT3Q9NZU0 649 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 GRID1Q9ULK0 1009 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CHMP2BQ9UQN3 213 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CAB39Q9Y376 341 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 ZC3H13Q5T200 1668 aaKnown RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 MYO3AQ8NEV4 1616 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ADGRB2O60241 1585 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ABCA8O94911 1581 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 KIAA1217Q5T5P2 1943 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 A0A087WUV0 522 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 A0A087WZ39 114 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PDXKO00764 312 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ACOT8O14734 319 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CHEK1O14757 476 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CIDEAO60543 219 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 LRCH4O75427 683 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PPP1R3DO95685 299 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 GPIP06744 558 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 HIST1H2AGP0C0S8 130 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 MARK3P27448 753 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ACADSBP45954 432 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 SLC1A6P48664 564 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 ART1P52961 327 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 LIMK2P53671 638 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 DMTNQ08495 405 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 MXD4Q14582 209 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 TMEM132DQ14C87 1099 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 P2RY6Q15077 328 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 DUSP5Q16690 384 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TPD52L1Q16890 204 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 KLHL40Q2TBA0 621 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PLPP4Q5VZY2 271 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 HIST2H2AA3Q6FI13 130 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TCEAL6Q6IPX3 200 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TRIM65Q6PJ69 517 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 RFPL4BQ6ZWI9 263 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 TAS2R42Q7RTR8 314 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 GCNT2Q8N0V5 402 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 PARP8Q8N3A8 854 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 FAM89BQ8N5H3 189 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 METTL27Q8N6F8 245 aaPredicted RBP2.61□□□□□ -1.99
HPS3-203ENST00000460822 OTUD6BQ8N6M0 293 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 OR1L3Q8NH93 324 aa2.61□□□□□ -1.99
HPS3-203ENST00000460822 CHPT1Q8WUD6 406 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms