RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SESN3P58005 492 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SMIM11AP58511 58 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 MRPS22P82650 360 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CDK6Q00534 326 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 MC2RQ01718 297 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 RHDQ02161 417 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC34A1Q06495 639 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CEACAM7Q14002 265 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SCARB2Q14108 478 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ELOAQ14241 798 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF267Q14586 743 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 LARS2Q15031 903 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 RCN1Q15293 331 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TAF11Q15544 211 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NKAIN1Q4KMZ8 207 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 LRRC23Q53EV4 343 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 STPG1Q5TH74 334 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 C1orf189Q5VU69 101 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 IRAK1BP1Q5VVH5 260 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 MLIPQ5VWP3 458 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CPZQ66K79 652 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PGM2L1Q6PCE3 622 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMEM107Q6UX40 140 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF793Q6ZN11 406 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 RRM2BQ7LG56 351 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC29A4Q7RTT9 530 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 RNF130Q86XS8 419 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMEM151BQ8IW70 566 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PEX5LQ8IYB4 626 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 VWA5B2Q8N398 1253 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 METTL27Q8N6F8 245 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CDRT4Q8N9R6 151 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SUMF1Q8NBK3 374 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR7G1Q8NGA0 311 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR1L3Q8NH93 324 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 FBXO27Q8NI29 283 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 GPR151Q8TDV0 419 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZFP90Q8TF47 636 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC9A6Q92581 669 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PMM1Q92871 262 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 KIAA1143Q96AT1 154 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF501Q96CX3 271 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ELP4Q96EB1 424 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NEURL3Q96EH8 262 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TPD52L3Q96J77 140 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SEPHS2Q99611 448 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 GPATCH1Q9BRR8 931 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CNPPD1Q9BV87 410 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TWSG1Q9GZX9 223 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 GLIPR2Q9H4G4 154 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 DENND2DQ9H6A0 471 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 KAT8Q9H7Z6 458 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CAAP1Q9H8G2 361 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 EVA1AQ9H8M9 152 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 GORASP2Q9H8Y8 452 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 Q9N2J8 555 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ADAP2Q9NPF8 381 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 EQTNQ9NQ60 294 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 C8orf4Q9NR00 106 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SELENONQ9NZV5 590 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 KCMF1Q9P0J7 381 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PDP2Q9P2J9 529 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 DHCR7Q9UBM7 475 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SEC14L3Q9UDX4 400 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CDV3Q9UKY7 258 aaKnown RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PADI1Q9ULC6 663 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC9A8Q9Y2E8 581 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 BTBD3Q9Y2F9 522 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 IFT52Q9Y366 437 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDHGA8Q9Y5G5 932 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ASXL3Q9C0F0 2248 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NINQ8N4C6 2090 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZDBF2Q9HCK1 2354 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SPTBP11277 2137 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 NUP210LQ5VU65 1888 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 A0A0G2JPF8 293 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 C17orf105B2RV13 164 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 HNRNPCL2B2RXH8 293 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 HNRNPCL3B7ZW38 293 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 H3BNH8 94 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 PLOD2O00469 737 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 CYR61O00622 381 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 NTN3O00634 580 aaPredicted RBP5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 CDX4O14627 284 aaPredicted RBP5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 PLD2O14939 933 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 ASNA1O43681 348 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 CSO75390 466 aaKnown RBP5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 STX11O75558 287 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 MT-CO3P00414 261 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 SERPINA1P01009 418 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 LDLRP01130 860 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 HMGN2P05204 90 aaKnown RBP5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 BCHEP06276 602 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 IFI6P09912 130 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 HNRNPCL4P0DMR1 293 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 RAP2AP10114 183 aa5.48□□□□□ -1.53
RNU1-88P-201ENST00000459274 ICAM2P13598 275 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms