RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 TM4SF19Q96DZ7 209 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 IP6K3Q96PC2 410 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 OR4K3Q96R72 315 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ATOH8Q96SQ7 321 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PAFAH2Q99487 392 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 RHOXF2Q9BQY4 288 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CAPS2Q9BXY5 557 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SPRTNQ9H040 489 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SLC26A1Q9H2B4 701 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ADNPQ9H2P0 1102 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 EPB41L4BQ9H329 900 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 EHD1Q9H4M9 534 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 WDR54Q9H977 334 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CNOT10Q9H9A5 744 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 AKIRIN1Q9H9L7 192 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CAB39LQ9H9S4 337 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PELI2Q9HAT8 420 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PLEKHA2Q9HB19 425 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 NMRAL1Q9HBL8 299 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SEMA4BQ9NPR2 832 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SNX15Q9NRS6 342 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CUTCQ9NTM9 273 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ING3Q9NXR8 418 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 NUDT4Q9NZJ9 180 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SLAMF8Q9P0V8 285 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 COPG2Q9UBF2 871 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 DNAJB11Q9UBS4 358 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 IL17BQ9UHF5 180 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ZFP69BQ9UJL9 534 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PTBP2Q9UKA9 531 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TMCO1Q9UM00 188 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 RUVBL1Q9Y265 456 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PADI2Q9Y2J8 665 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 KLHL20Q9Y2M5 609 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ACOT9Q9Y305 439 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CACNA1GO43497 2377 aa4.39□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SEC16AO15027 2179 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 A0A096LPK6 155 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 LOC105369274A0A096LPK9 316 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 LOC102723532A0A0G2JNH3 316 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 A0A0J9YVX5 310 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 EXOC1LA0A1B0GW35 172 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 A0A1W2PQ09 198 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 A0A1W2PQ72 361 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 GXYLT2A0PJZ3 443 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 HYKKA2RU49 373 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SYCE1LA8MT33 242 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 RTCAO00442 366 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 HAT1O14929 419 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PRPF4O43172 522 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ADAM20O43506 726 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 KLK8O60259 260 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PSPNO60542 156 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 KLF7O75840 302 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 KLHL2O95198 593 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SLU7O95391 586 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 MED26O95402 600 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 GUCA1CO95843 209 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 IGHEP01854 428 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 HPXP02790 462 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SNRPAP09012 282 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SFTPCP11686 197 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CDH1P12830 882 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TFEBP19484 476 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ITGAXP20702 1163 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 CXCR2P25025 360 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TYK2P29597 1187 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 AHRP35869 848 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PPP5CP53041 499 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 VSX2P58304 361 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 YBX1P67809 324 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 REEP5Q00765 189 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 SF3A3Q12874 501 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 DLG1Q12959 904 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 DUSP8Q13202 625 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TSTA3Q13630 321 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 BMPR2Q13873 1038 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 NDUFA9Q16795 377 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 FAM153CQ494X1 144 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 MMEL1Q495T6 779 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 WASHC2DQ5SRD0 308 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 LGSNQ5TDP6 509 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 LCN10Q6JVE6 187 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 HMBOX1Q6NT76 420 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 NIPAL1Q6NVV3 410 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 WDR93Q6P2C0 686 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 KLC3Q6P597 504 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 PCSK4Q6UW60 755 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 LRRC70Q7Z2Q7 622 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 ADCK2Q7Z695 626 aa4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 THOC6Q86W42 341 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC28P-201ENST00000459249 TDRPQ86YL5 185 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms