RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KHDRBS2Q5VWX1 349 aaKnown RBP13.39□□□□□ -0.27
SCFD1-203ENST00000458591 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 TMPRSS11AQ6ZMR5 421 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 KRT73Q86Y46 540 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 NUS1Q96E22 293 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 EGLN3Q9H6Z9 239 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 PLSCR3Q9NRY6 295 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 TRPC4Q9UBN4 977 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 SEC14L3Q9UDX4 400 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-203ENST00000458591 GOLGA4Q13439 2230 aaKnown RBP13.39□□□□□ -0.27
SCFD1-203ENST00000458591 DENND4CQ5VZ89 1909 aa13.39□□□□□ -0.27
SCFD1-203ENST00000458591 A0A075B6Q4 140 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 EPHX1P07099 455 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 IL7P13232 177 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 WDR5P61964 334 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 PSPHP78330 225 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 HOXC5Q00444 222 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 RHAGQ02094 409 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 NOGQ13253 232 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 GPR50Q13585 617 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 GINS1Q14691 196 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 ZNF77Q15935 545 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 USP30Q70CQ3 517 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 GLCCI1Q86VQ1 547 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 IQCHQ86VS3 1027 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SNX18Q96RF0 628 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TREX2Q9BQ50 279 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TRAPPC4Q9Y296 219 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 MPZL2O60487 215 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SRPRAP08240 638 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 PSMA1P25786 263 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 CCT3P49368 545 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 RORCP51449 518 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 RPS25P62851 125 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 MRPS15P82914 257 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 INSL4Q14641 139 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 HEPACAMQ14CZ8 416 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 LARS2Q15031 903 aaKnown RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 GPR19Q15760 415 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 MFSD4BQ5TF39 518 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 UBE3DQ7Z6J8 389 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 OR5P2Q8WZ92 322 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SMPDL3AQ92484 453 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 KLK6Q92876 244 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 MTERF3Q96E29 417 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 LRR1Q96L50 414 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TM9SF2Q99805 663 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 TTYH2Q9BSA4 534 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 LGR4Q9BXB1 951 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 SRRQ9GZT4 340 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 RACGAP1Q9H0H5 632 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 A4GALTQ9NPC4 353 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCFD1-203ENST00000458591 STUB1Q9UNE7 303 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 ICKQ9UPZ9 632 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 KCNE3Q9Y6H6 103 aa13.38□□□□□ -0.27
SCFD1-203ENST00000458591 PIPP12273 146 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 RPL3P39023 403 aaKnown RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 GSTM5P46439 218 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 PCBP4P57723 403 aaKnown RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 NCF4Q15080 339 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 ZFP69Q49AA0 526 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 ARMC4Q5T2S8 1044 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 UNC5DQ6UXZ4 953 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 CCDC149Q6ZUS6 474 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 KIF18BQ86Y91 864 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 CAMKK1Q8N5S9 505 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 FBXO15Q8NCQ5 510 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 OR6T1Q8NGN1 323 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 ST6GAL2Q96JF0 529 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
SCFD1-203ENST00000458591 FUZQ9BT04 418 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 MS4A8Q9BY19 250 aa13.37□□□□□ -0.27
SCFD1-203ENST00000458591 AICDAQ9GZX7 198 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms