RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C4orf51C9J302 202 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 FAAHO00519 579 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 MAN2B1O00754 1011 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 H1F0P07305 194 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 TPTEP56180 551 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 WASH2PQ6VEQ5 465 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 LACC1Q8IV20 430 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 YAF2Q8IY57 180 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 TBC1D19Q8N5T2 526 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 FAM46DQ8NEK8 389 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 MCFD2Q8NI22 146 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 EFHD2Q96C19 240 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 YIPF2Q9BWQ6 316 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 RAB11FIP5Q9BXF6 653 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 RMI1Q9H9A7 625 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 ZBTB20Q9HC78 741 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC6A20Q9NP91 592 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 ABCB10Q9NRK6 738 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 CLN6Q9NWW5 311 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 EYSQ5T1H1 3165 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC15A1P46059 708 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 PCYT1AP49585 367 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 SELENBP1Q13228 472 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 LEXMQ3ZCV2 418 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 ARMCX4Q5H9R4 360 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF362Q5T0B9 420 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 DCST1Q5T197 706 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 SLX4IPQ5VYV7 408 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 FAM92BQ6ZTR7 304 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 FAM20CQ8IXL6 584 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 OR52E1Q8NGJ3 308 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 MS4A6EQ96DS6 147 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC25A19Q9HC21 320 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 FZD3Q9NPG1 666 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 PRDM8Q9NQV8 689 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 P2RX2Q9UBL9 471 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 ASB4Q9Y574 426 aa17.37■□□□□ 0.37
SEMA3B-209ENST00000456560 METTL15A6NJ78 407 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 RFXAPO00287 272 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 KCNJ13O60928 360 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 RPLP0P05388 317 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 POU1F1P28069 291 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 RGS6P49758 472 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 CRISP3P54108 245 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 SNRPGP62308 76 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 RPS21P63220 83 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 MRM1Q6IN84 353 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 DEF8Q6ZN54 512 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 USP43Q70EL4 1123 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF367Q7RTV3 350 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 COMTD1Q86VU5 262 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF513Q8N8E2 541 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 OR5D16Q8NGK9 328 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 VANGL1Q8TAA9 524 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 FAIM2Q9BWQ8 316 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 MMP27Q9H306 513 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 MVB12BQ9H7P6 319 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 MRPS30Q9NP92 439 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 PRDM7Q9NQW5 492 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 SEC14L3Q9UDX4 400 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 EPOPA6NHQ4 379 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 TLR4O00206 839 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC13A2Q13183 592 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 SGCGQ13326 291 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 PPP2R2DQ66LE6 453 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 PGBD2Q6P3X8 592 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 XAGE5Q8WWM1 108 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 MACROD1Q9BQ69 325 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 BCL2L10Q9HD36 194 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 SEMA3GQ9NS98 782 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 DZANK1Q9NVP4 752 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 A4GNTQ9UNA3 340 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 NINQ8N4C6 2090 aa17.36■□□□□ 0.37
SEMA3B-209ENST00000456560 OR52A4PA6NMU1 304 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 HAT1O14929 419 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 PRKRAO75569 313 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 UPK1BO75841 260 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 STATHP02808 62 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 PIPP12273 146 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 HOXB3P14651 431 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 GPC1P35052 558 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 IGFALSP35858 605 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 NCBP2P52298 156 aaKnown RBP eCLIP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 DGKEP52429 567 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SMIM11AP58511 58 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ABATP80404 500 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 CDC20Q12834 499 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC9A5Q14940 896 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 UAP1L1Q3KQV9 507 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 TOR1AIP1Q5JTV8 583 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF776Q68DI1 518 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 C12orf73Q69YU5 71 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 PLAG1Q6DJT9 500 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ABHD17CQ6PCB6 329 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 C19orf48Q6RUI8 117 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 TMEM64Q6YI46 380 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 NUDT18Q6ZVK8 323 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 HTRA1Q92743 480 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 KXD1Q9BQD3 176 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SARGQ9BW04 601 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms