RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TMEM168Q9H0V1 697 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 WBP1LQ9NX94 342 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 KLHL28Q9NXS3 571 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 MAT2BQ9NZL9 334 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 RABL2AQ9UBK7 228 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 MAP1BP46821 2468 aaKnown RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 C1orf226A1L170 272 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 HTR3EA5X5Y0 456 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 FOXE1O00358 373 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PDE9AO76083 593 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PAPLNO95428 1278 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 CDH3P22223 829 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 ACADLP28330 430 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 RXRGP48443 463 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 CRISP1P54107 249 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 SLC35A2P78381 396 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 TFF2Q03403 129 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PRDX1Q06830 199 aaKnown RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 TGM3Q08188 693 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 FCHO2Q0JRZ9 810 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 IL18R1Q13478 541 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 BCL7AQ4VC05 210 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 KLHL12Q53G59 568 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 SLC35F1Q5T1Q4 408 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 C10orf62Q5T681 223 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 LAIR2Q6ISS4 152 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 KIAA1161Q6NSJ0 714 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 CCDC71Q8IV32 467 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 PJA1Q8NG27 643 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 TEFMQ96QE5 360 aaKnown RBP11.34□□□□□ -0.59
SMPD4-213ENST00000454468 TTTY10Q9BZA0 68 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 GLIPR2Q9H4G4 154 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 ABCB9Q9NP78 766 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 ATP6V1HQ9UI12 483 aa11.34□□□□□ -0.59
SMPD4-213ENST00000454468 ENTPD6O75354 484 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 FUCA1P04066 466 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 GSTT2P0CG29 244 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 GSTT2BP0CG30 244 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 CHMP24386 653 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 IDUAP35475 653 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 BCL6P41182 706 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 KCNC4Q03721 635 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 GINS1Q14691 196 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TAB1Q15750 504 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 VN1R5Q7Z5H4 357 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TAF8Q7Z7C8 310 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 PPP1R14BQ96C90 147 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 THAP10Q9P2Z0 257 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ACSL5Q9ULC5 683 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 OR6C74A6NCV1 312 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TFECO14948 347 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 GGT2P36268 569 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 PPP2CBP62714 309 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 PPP2CAP67775 309 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 LIPKQ5VXJ0 399 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ARMC6Q6NXE6 501 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 USP30Q70CQ3 517 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 RLN3Q8WXF3 142 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 HPS1Q92902 700 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 RAB7BQ96AH8 199 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 APOOQ9BUR5 198 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 PCBD2Q9H0N5 130 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 NEUROD4Q9HD90 331 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 NTNG1Q9Y2I2 539 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 YBX2Q9Y2T7 364 aaKnown RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 COLEC10Q9Y6Z7 277 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TDRD6O60522 2096 aaKnown RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 C17orf113A0A1B0GUU1 675 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 CLDN24A6NM45 220 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 CLCA1A8K7I4 914 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 AP3D1O14617 1153 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 SLC22A1O15245 554 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 LDB3O75112 727 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TNFRSF21O75509 655 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 WBP4O75554 376 aaKnown RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 GCM2O75603 506 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ARAFP10398 606 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ITGAMP11215 1152 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ITIH1P19827 911 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ACSL1P33121 698 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 MPIP34949 423 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TAS2R38P59533 333 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 RGS1Q08116 209 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 RBBP4Q09028 425 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 KEAP1Q14145 624 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 AGBL4Q5VU57 503 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 MLIPQ5VWP3 458 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms