RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SERTAD2Q14140 314 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EXOSC7Q15024 291 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LTB4RQ15722 352 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NTRK2Q16620 822 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MPEG1Q2M385 716 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KHDRBS2Q5VWX1 349 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ANGPTL8Q6UXH0 198 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC29A4Q7RTT9 530 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF550Q7Z398 422 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZBED8Q8IZ13 594 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PDIK1LQ8N165 341 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NKAPQ8N5F7 415 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF441Q8N8Z8 693 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PDPRQ8NCN5 879 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MAPK1IP1LQ8NDC0 245 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM83FQ8NEG4 500 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR7G3Q8NG95 312 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR8K3Q8NH51 312 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HUS1BQ8NHY5 278 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GABPB2Q8TAK5 448 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GRK7Q8WTQ7 553 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NUDT8Q8WV74 236 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 INTS12Q96CB8 462 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HSPBAP1Q96EW2 488 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PTCD3Q96EY7 689 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZC3HAV1LQ96H79 300 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PDLIM5Q96HC4 596 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 COX4I2Q96KJ9 171 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 Q96MF0 132 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HS3ST6Q96QI5 342 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TUBA1CQ9BQE3 449 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MCMBPQ9BTE3 642 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 G6PC3Q9BUM1 346 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EFCAB11Q9BUY7 163 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RBM24Q9BX46 236 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PHACTR1Q9C0D0 580 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DERL2Q9GZP9 239 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PRDM14Q9GZV8 571 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UBQLN3Q9H347 655 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RPF2Q9H7B2 306 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KLHL28Q9NXS3 571 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RNF14Q9UBS8 474 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ADAM21Q9UKJ8 722 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CORO1CQ9ULV4 474 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RNF112Q9ULX5 631 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ABCA1O95477 2261 aa5.46□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RAI1Q7Z5J4 1906 aaPredicted RBP5.46□□□□□ -1.53
HLA-DPA3-207ENST00000454398 A0A0A6YYD5 115 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IQANK1A0A1B0GTG1 560 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SH3D21A4FU49 640 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MBD3L5A6NJ08 208 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 H0YC42 278 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDK2AP1O14519 115 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PGRMC2O15173 223 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SMNDC1O75940 238 aaKnown RBP eCLIP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SEC31AO94979 1220 aaKnown RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EPPINO95925 133 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IL2RAP01589 272 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EPXP11678 715 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SSTR1P30872 391 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 STARP49675 285 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC12A2P55011 1212 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NR1H2P55055 460 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TPD52P55327 224 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ARL4CP56559 192 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SIRPAP78324 504 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DR1Q01658 176 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DUSP2Q05923 314 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RCN2Q14257 317 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MORF4L2Q15014 288 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 AP5B1Q2VPB7 878 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KBTBD12Q3ZCT8 623 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FBXL19-AS1Q494R0 122 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UBAP2Q5T6F2 1119 aaKnown RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NSUN5P2Q63ZY6 315 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR5M10Q6IEU7 315 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MED27Q6P2C8 311 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LRRC70Q7Z2Q7 622 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MAATS1Q7Z4T9 603 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPR180Q86V85 440 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LRRC8AQ8IWT6 810 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TEX9Q8N6V9 391 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BBOF1Q8ND07 529 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SPPL2AQ8TCT8 520 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ACTRT1Q8TDG2 376 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RIT1Q92963 219 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NTNG2Q96CW9 530 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WDR34Q96EX3 536 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WDYHV1Q96HA8 205 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PBKQ96KB5 322 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDK15Q96Q40 435 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HBEGFQ99075 208 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms