RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 GPR22Q99680 433 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF559Q9BR84 538 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 KLF16Q9BXK1 252 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SLC6A16Q9GZN6 736 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 NUAK2Q9H093 628 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 HRH4Q9H3N8 390 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 FN3KRPQ9HA64 309 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 KCNK9Q9NPC2 374 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 IL23AQ9NPF7 189 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 KLHL1Q9NR64 748 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 KLHL28Q9NXS3 571 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SPG21Q9NZD8 308 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 THEGQ9P2T0 379 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 A0A0B4J293 547 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TEX13CA0A0J9YWL9 993 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 A0A1W2PR77 199 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF840PA6NDX5 716 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CTDSPLO15194 276 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 VPS26AO75436 327 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CD3EP07766 207 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 THBS1P07996 1170 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 OR4Q2P0C623 313 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PIM1P11309 404 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 GNSP15586 552 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TACR2P21452 398 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 VHLP40337 213 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SESN2P58004 480 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TAF10Q12962 218 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF7Q5VXH5 474 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TMEM220Q6QAJ8 160 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CENPVQ7Z7K6 275 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ZSWIM9Q86XI8 627 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 WBP2Q969T9 261 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CENPKQ9BS16 269 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 DCLRE1BQ9H816 532 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CCNB1IP1Q9NPC3 277 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SAR1AQ9NR31 198 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PRG3Q9Y2Y8 225 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TCAF1Q9Y4C2 921 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PLSCR5A0PG75 271 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ILVBLA1L0T0 632 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 MROH6A6NGR9 719 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 COPEO14579 308 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 BCKDKO14874 412 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 DCTN3O75935 186 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 WISP3O95389 354 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CRYZL1O95825 349 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 GSRP00390 522 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 HLA-DQB2P05538 268 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 LINC00271P0C7V0 271 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ICAM2P13598 275 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TACR3P29371 465 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 OR1E1P30953 314 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ATP5IP56385 69 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 WNT3P56703 355 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SIM1P81133 766 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 HLXQ14774 488 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 NDUFA5Q16718 116 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PDE4DIPQ5VU43 2346 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FCRL6Q6DN72 434 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TRMT10BQ6PF06 316 aaKnown RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ARSKQ6UWY0 536 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ADGRD2Q7Z7M1 963 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF595Q8IYB9 648 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 UBE2J2Q8N2K1 259 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PROX1Q92786 737 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 RFT1Q96AA3 541 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ITPKCQ96DU7 683 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 C14orf79Q96F83 325 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 MRGPRX2Q96LB1 330 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FEM1AQ9BSK4 669 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TMEM245Q9H330 911 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 RHOJQ9H4E5 214 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 DIABLOQ9NR28 239 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TXNDC16Q9P2K2 825 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 DNMT3BQ9UBC3 853 aaKnown RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 DENND4AQ7Z401 1863 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CLDN11O75508 207 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 KRT36O76013 467 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SEC14L2O76054 403 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 LY86O95711 162 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FCER2P06734 321 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 BPGMP07738 259 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 HNF1AP20823 631 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SERPINB5P36952 375 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CEACAM3P40198 252 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 GRIA1P42261 906 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ARRB1P49407 418 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CAMPP49913 170 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 RAB28P51157 221 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 NKX2-5P52952 324 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 RABGGTBP53611 331 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FPGSQ05932 587 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 KCTD19Q17RG1 926 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PLCXD3Q63HM9 321 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms