RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CAPN13Q6MZZ7 669 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 TMEM207Q6UWW9 146 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 PAQR9Q6ZVX9 377 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 GPC2Q8N158 579 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 TEX26Q8N6G2 289 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 SLC37A3Q8NCC5 494 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR8J1Q8NGP2 316 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 SMPDL3AQ92484 453 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 DYRK2Q92630 601 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 C10orf90Q96M02 699 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 ERGIC2Q96RQ1 377 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 LITAFQ99732 161 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 GON7Q9BXV9 100 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 LRRCC1Q9C099 1032 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 VIPAS39Q9H9C1 493 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 COG4Q9H9E3 785 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 AIPL1Q9NZN9 384 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 POLKQ9UBT6 870 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 DBF4Q9UBU7 674 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 MIOXQ9UGB7 285 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 MRPS33Q9Y291 106 aaKnown RBP4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 UMODL1Q5DID0 1318 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 NSD2O96028 1365 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 GSAPA4D1B5 854 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 YJEFN3A6XGL0 299 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 SAP30O75446 220 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 KHDRBS3O75525 346 aaKnown RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CDC123O75794 336 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 UFL1O94874 794 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 IL1BP01584 269 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 GP9P14770 177 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CEBPBP17676 345 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCNCP24863 283 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CTNNA2P26232 953 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TRIM23P36406 574 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 MTIF2P46199 727 aaKnown RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 ATP5OP48047 213 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 NAPAP54920 295 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 KRTAP1-1Q07627 177 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CLPPQ16740 277 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 IMMTQ16891 758 aaKnown RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZSWIM7Q19AV6 140 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TMEM30BQ3MIR4 351 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 POM121L1PQ3SYA9 428 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 PLPP4Q5VZY2 271 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCDC73Q6ZRK6 1079 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TAS2R42Q7RTR8 314 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 LHFPL4Q7Z7J7 247 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 FAM131BQ86XD5 332 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 NIPA2Q8N8Q9 360 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF397Q8NF99 534 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 RLN3Q8WXF3 142 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TMEM37Q8WXS4 190 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 PINX1Q96BK5 328 aaKnown RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF274Q96GC6 653 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 PCED1BQ96HM7 432 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 SENP8Q96LD8 212 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TESK2Q96S53 571 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 TBCDQ9BTW9 1192 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 NLNQ9BYT8 704 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 THAP2Q9H0W7 228 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 EPHA6Q9UF33 1036 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 PRDM4Q9UKN5 801 aa4.37□□□□□ -1.71
HMGB1P26-201ENST00000452520 A0A087WW49 117 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 TRBV4-1A0A0J9YWV2 114 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 ASB14A6NK59 587 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 P2RX6O15547 441 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 EXTL3O43909 919 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 TM7SF2O76062 418 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 NDUFA7O95182 113 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 GOT2P00505 430 aaKnown RBP4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 HPRP00739 348 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 MT-ND1P03886 318 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 GLRA1P23415 457 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 AIF1P55008 147 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 DCDC1P59894 354 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 BTG1P62324 171 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 PDK3Q15120 406 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 LRIT3Q3SXY7 679 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF311Q5JNZ3 666 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 FGD3Q5JSP0 725 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 SLC25A47Q6Q0C1 308 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 FCRLAQ7L513 359 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 LSMEM2Q8N112 164 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 ELMOD1Q8N336 334 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 DCLK2Q8N568 766 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCDC185Q8N715 623 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 TCEANCQ8N8B7 351 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 MLKLQ8NB16 471 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 DDHD1Q8NEL9 900 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR1L3Q8NH93 324 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 FBXO32Q969P5 355 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 COG3Q96JB2 828 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 KRT12Q99456 494 aa4.36□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCDC77Q9BR77 488 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms