RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 EBPLQ9BY08 206 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 CFAP97Q9P2B7 532 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 PRKAB1Q9Y478 270 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 CHST2Q9Y4C5 530 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 PCDH7O60245 1069 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 PDYNP01213 254 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 DRD5P21918 477 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 GSTM5P46439 218 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 SP140Q13342 867 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 TTLL4Q14679 1199 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 IFI44LQ53G44 452 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 AFMIDQ63HM1 303 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 SHFQ7M4L6 423 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 ATAD1Q8NBU5 361 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 OR4K2Q8NGD2 314 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 SCARB1Q8WTV0 552 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 WDR89Q96FK6 387 aaPredicted RBP17.72■□□□□ 0.43
PTPA-223ENST00000452489 CMSS1Q9BQ75 279 aaKnown RBP17.72■□□□□ 0.43
PTPA-223ENST00000452489 PDGFCQ9NRA1 345 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 KLK14Q9P0G3 267 aa17.72■□□□□ 0.43
PTPA-223ENST00000452489 PLSCR5A0PG75 271 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 PIRO00625 290 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 DVL2O14641 736 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 FGF10O15520 208 aaPredicted RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 SDC3O75056 442 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 EIF4EP06730 217 aaKnown RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 CTPS1P17812 591 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 AKAP5P24588 427 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 AFF1P51825 1210 aaKnown RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 WNT3P56703 355 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 WNT4P56705 351 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 SIM1P81133 766 aaPredicted RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 SLC36A2Q495M3 483 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 ZRANB3Q5FWF4 1079 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 RAB11FIP2Q7L804 512 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 MARCH9Q86YJ5 346 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 NEIL3Q8TAT5 605 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 SFT2D1Q8WV19 159 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 PSMG2Q969U7 264 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 FCRL1Q96LA6 429 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 DNTTIP1Q9H147 329 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 TBC1D17Q9HA65 648 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 MRTO4Q9UKD2 239 aaKnown RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 ZNF593O00488 134 aaPredicted RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 GPR39O43194 453 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 SLC19A2O60779 497 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 GADD45GO95257 159 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 TFP02787 698 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 PREPP48147 710 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 MC2RQ01718 297 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 HLXQ14774 488 aaPredicted RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 TMEM201Q5SNT2 666 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 ATXN7L2Q5T6C5 722 aaPredicted RBP17.71■□□□□ 0.43
PTPA-223ENST00000452489 FGD2Q7Z6J4 655 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 ADAMTS14Q8WXS8 1223 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 APIPQ96GX9 242 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 C10orf90Q96M02 699 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 ABHD1Q96SE0 405 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 SEMA3CQ99985 751 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 APOL5Q9BWW9 433 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 NKIRAS2Q9NYR9 191 aa17.71■□□□□ 0.43
PTPA-223ENST00000452489 EIF1BO60739 113 aaKnown RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 SCN2BO60939 215 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 RAB36O95755 333 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 HMBSP08397 361 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 CD3GP09693 182 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 FGF9P31371 208 aaPredicted RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 CHI3L1P36222 383 aaPredicted RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 EIF1P41567 113 aaKnown RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 LIMS1P48059 325 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 MELKQ14680 651 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 IDNKQ5T6J7 187 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 C5orf46Q6UWT4 87 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 Q6ZTK2 550 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 NR2C2APQ86WQ0 139 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 NAGSQ8N159 534 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 IQCF1Q8N6M8 205 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 RTL3Q8N8U3 475 aaKnown RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 APOLD1Q96LR9 279 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 EGFL8Q99944 293 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 NMUR1Q9HB89 426 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 CRTAC1Q9NQ79 661 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 SLC22A7Q9Y694 548 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 ANKDD1BA6NHY2 528 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 H3BN98 237 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 HOXC13P31276 330 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 GABRA5P31644 462 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 TPBGQ13641 420 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 PAN3Q58A45 887 aaKnown RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 ALG1LQ6GMV1 187 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 SIAH3Q8IW03 269 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 EIF4E3Q8N5X7 224 aaKnown RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 DBF4BQ8NFT6 615 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 OR6S1Q8NH40 331 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 HUS1BQ8NHY5 278 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 ZNF707Q96C28 371 aaPredicted RBP17.7■□□□□ 0.42
PTPA-223ENST00000452489 OR4K3Q96R72 315 aa17.7■□□□□ 0.42
PTPA-223ENST00000452489 LINC00597Q9H2U6 94 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms