RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CPMP14384 443 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 COX6B1P14854 86 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PORP16435 677 aaPredicted RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 IMPDH1P20839 514 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 SSTR4P31391 388 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PIGAP37287 484 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 MAGEA5P43359 124 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 NR0B1P51843 470 aaKnown RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 KCNJ2P63252 427 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PRAMEF20Q5VT98 475 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 GPRIN3Q6ZVF9 776 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 GSPT2Q8IYD1 628 aaKnown RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 TMEM251Q8N6I4 163 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 METTL6Q8TCB7 284 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PAQR8Q8TEZ7 354 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 SDCCAG3Q96C92 435 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 TMEM237Q96Q45 408 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 DMRTA2Q96SC8 542 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 ZNF382Q96SR6 550 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 HBEGFQ99075 208 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 FAIM2Q9BWQ8 316 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 TXLNGYQ9BZA5 131 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 LDAHQ9H6V9 325 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 TUBA8Q9NY65 449 aaPredicted RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 CNIH4Q9P003 139 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 VPS29Q9UBQ0 182 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 ZNF225Q9UK10 706 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PSME2Q9UL46 239 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 BOKQ9UMX3 212 aaPredicted RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 ATP6AP2A0A1C7CYW4 349 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 A0A1W2PS29 197 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 NPIPA2E9PIF3 369 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 NPIPA3F8WFD2 350 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 MANBAO00462 879 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 ADAM10O14672 748 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 ULK1O75385 1050 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 ERAL1O75616 437 aaKnown RBP14.08□□□□□ -0.16
CHD3-205ENST00000449744 ATP6AP2O75787 350 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 ESRRBO95718 433 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 FBXO45P0C2W1 286 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 HSD3B1P14060 373 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 HSD3B2P26439 372 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 ALDH9A1P49189 494 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 PRKAA2P54646 552 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 GALNT1Q10472 559 aaPredicted RBP14.08□□□□□ -0.16
CHD3-205ENST00000449744 SLC10A1Q14973 349 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 TCHHL1Q5QJ38 904 aaPredicted RBP14.08□□□□□ -0.16
CHD3-205ENST00000449744 SLC48A1Q6P1K1 146 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 LYPD8Q6UX82 237 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 TICAM1Q8IUC6 712 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 C1orf52Q8N6N3 182 aaKnown RBP14.08□□□□□ -0.16
CHD3-205ENST00000449744 OR5M3Q8NGP4 307 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 CA5BP1Q8WTZ4 195 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 UBLCP1Q8WVY7 318 aaPredicted RBP14.08□□□□□ -0.16
CHD3-205ENST00000449744 TP53INP1Q96A56 240 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 SMC6Q96SB8 1091 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 BRINP2Q9C0B6 783 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 OR10A5Q9H207 317 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 EXO5Q9H790 373 aa14.08□□□□□ -0.16
CHD3-205ENST00000449744 NCOA6Q14686 2063 aaPredicted RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 CCDC151A5D8V7 595 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 OR14I1A6ND48 311 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 TP53I11O14683 189 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 BCKDKO14874 412 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 GLRA3O75311 464 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 CLPSP04118 112 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 SNRPB2P08579 225 aaKnown RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 CT62P0C5K7 136 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 CSNK2A2P19784 350 aaPredicted RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 PTGER4P35408 488 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 MAN2A2P49641 1150 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 TMED10P49755 219 aaKnown RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 PKNOX1P55347 436 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 NRG3P56975 720 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 TRA2BP62995 288 aaKnown RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 FUT7Q11130 342 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 FOXO1Q12778 655 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 CSTF3Q12996 717 aaKnown RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 LCP2Q13094 533 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 HYAL4Q2M3T9 481 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 GXYLT1Q4G148 440 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 MCEMP1Q8IX19 187 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 FBXW8Q8N3Y1 598 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 EIF1ADQ8N9N8 165 aaKnown RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 OR7G1Q8NGA0 311 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 OR10G3Q8NGC4 313 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 TM4SF18Q96CE8 201 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 KLHL29Q96CT2 875 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 CCDC126Q96EE4 140 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 L3HYPDHQ96EM0 354 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 JSRP1Q96MG2 331 aaPredicted RBP14.07□□□□□ -0.16
CHD3-205ENST00000449744 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 SH2D2AQ9NP31 389 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 B4GALT7Q9UBV7 327 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 CFL2Q9Y281 166 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 ZNF780BQ9Y6R6 833 aa14.07□□□□□ -0.16
CHD3-205ENST00000449744 NBPF19A0A087WUL8 3843 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms