RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 EPYCQ99645 322 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 SIRT5Q9NXA8 310 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 MED16Q9Y2X0 877 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 CDH10Q9Y6N8 788 aa12.82□□□□□ -0.36
SYNGAP1-204ENST00000449372 SIGLEC6O43699 453 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 LATS1O95835 1130 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ECDO95905 644 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 APOC3P02656 99 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 STOMP27105 288 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 RHOAP61586 193 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 SP140Q13342 867 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR4F3Q6IEY1 312 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 KANSL1Q7Z3B3 1105 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 TMEM145Q8NBT3 493 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 MDGA1Q8NFP4 955 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ESAMQ96AP7 390 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLC32A1Q9H598 525 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 PPIEQ9UNP9 301 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF670-ZNF695F2Z2N8 137 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 GNB5O14775 395 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 AKAP8O43823 692 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 LALBAP00709 142 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 BCKDHAP12694 445 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 DSG2Q14126 1118 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 DOK6Q6PKX4 331 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 DNAJC5GQ8N7S2 189 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 DENND6BQ8NEG7 585 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF197O14709 1029 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 TGM6O95932 706 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 KDELR2P33947 212 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 SOX3P41225 446 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 HNMTP50135 292 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ITGA1P56199 1179 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 RIPPLY1Q0D2K3 151 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 BCL2L15Q5TBC7 163 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF621Q6ZSS3 439 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 DNAJB7Q7Z6W7 309 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CALHM3Q86XJ0 350 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CLN6Q9NWW5 311 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 THUMPD1Q9NXG2 353 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 CTSFQ9UBX1 484 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 PCDHGB7Q9Y5F8 929 aa12.81□□□□□ -0.36
SYNGAP1-204ENST00000449372 ABHD14A-ACY1A0A1B0GW23 586 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 A8MXK9 166 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 NRG2O14511 850 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 FPGTO14772 594 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 C8GP07360 202 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 GGT2P36268 569 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 SSTP61278 116 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 PLD1Q13393 1074 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 PTGR1Q14914 329 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 TSC22D1Q15714 1073 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 TMEM107Q6UX40 140 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 GPR65Q8IYL9 337 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 RGL4Q8IZJ4 473 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 B3GNT7Q8NFL0 401 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 UCN3Q969E3 161 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLC25A46Q96AG3 418 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 MSLNLQ96KJ4 702 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF558Q96NG5 402 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 TAPBPLQ9BX59 468 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ASB8Q9H765 288 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 MS4A12Q9NXJ0 267 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 GTPBP1O00178 669 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 CLIC1O00299 241 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 QSOX1O00391 747 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 HLA-DQB1P01920 261 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 HK3P52790 923 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 C1DQ13901 141 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZDHHC20Q5W0Z9 365 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR2T4Q8NH00 348 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 NANPQ8TBE9 248 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 SKA2Q8WVK7 121 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF768Q9H5H4 540 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 COX7A2P14406 83 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 DNASE1P24855 282 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 CRYZQ08257 329 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 SF3A2Q15428 464 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 GDPGP1Q6ZNW5 385 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 C11orf65Q8NCR3 313 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 DPH7Q9BTV6 452 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 ANKRA2Q9H9E1 313 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms