RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ABCB1P08183 1280 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 SOX18P35713 384 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ID4P47928 161 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 MGAT2Q10469 447 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 GAB1Q13480 694 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PRICKLE4Q2TBC4 344 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 TMEM205Q6UW68 189 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 TMEM64Q6YI46 380 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 DGAT2L6Q6ZPD8 337 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 NKD1Q969G9 470 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 RBM18Q96H35 190 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF578Q96N58 590 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 CGREF1Q99674 301 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 GPATCH1Q9BRR8 931 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 SCNM1Q9BWG6 230 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 GPR87Q9BY21 358 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 SEMA3GQ9NS98 782 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 TAS2R1Q9NYW7 299 aa13.15□□□□□ -0.3
SHMT2-203ENST00000449049 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.3
SHMT2-203ENST00000449049 ANP32DO95626 131 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 NT5EP21589 574 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 PTGER1P34995 402 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 GPC1P35052 558 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 NCALDP61601 193 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 MXRA7P84157 204 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 DNASE1L3Q13609 305 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 ANKRD37Q7Z713 158 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 TRIML2Q8N7C3 387 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 ADCY4Q8NFM4 1077 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 CTHRC1Q96CG8 243 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 HOPXQ9BPY8 73 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-203ENST00000449049 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 CXorf21Q9HAI6 301 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 ADAP2Q9NPF8 381 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 MAT2BQ9NZL9 334 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 FARSAQ9Y285 508 aaKnown RBP13.14□□□□□ -0.31
SHMT2-203ENST00000449049 GMEB1Q9Y692 573 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 SCN2AQ99250 2005 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 CEP250Q9BV73 2442 aa13.14□□□□□ -0.31
SHMT2-203ENST00000449049 H0YHG0 523 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 LIPCP11150 499 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 UQCRC2P22695 453 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 DLSTP36957 453 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 FOLR3P41439 243 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 RASSF2P50749 326 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SLC25A3Q00325 362 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 MAP4K2Q12851 820 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 CAPRIN1Q14444 709 aaKnown RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 ELAVL1Q15717 326 aaKnown RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 RUNDC3AQ59EK9 446 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 C16orf89Q6UX73 402 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF621Q6ZSS3 439 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SFXN5Q8TD22 340 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 RIT1Q92963 219 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 ANKRD27Q96NW4 1050 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.13□□□□□ -0.316e-6■■□□□ 12.1
SHMT2-203ENST00000449049 NTMQ9P121 344 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 A0A087WV62 115 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 LOC101059948A0A1B0GTJ6 334 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 PCDH17O14917 1159 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 IFNA16P05015 189 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 CT62P0C5K7 136 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SPINK2P20155 84 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 PTPN4P29074 926 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 MC3RP41968 323 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 RPS15P62841 145 aaKnown RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 FHL5Q5TD97 284 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 FAM69BQ5VUD6 431 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 GALNT12Q8IXK2 581 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 OR7G2Q8NG99 324 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 ZFP90Q8TF47 636 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 PTPMT1Q8WUK0 201 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 KAT2AQ92830 837 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 MOAP1Q96BY2 351 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 CPPED1Q9BRF8 314 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 BTBD10Q9BSF8 475 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF639Q9UID6 485 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 MSRB2Q9Y3D2 182 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 SNX8Q9Y5X2 465 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
SHMT2-203ENST00000449049 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 PLOD3O60568 738 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 IGHEP01854 428 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 F8A1P23610 371 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms