RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SH3GL1Q99961 368 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 PELOQ9BRX2 385 aaKnown RBP18.29■□□□□ 0.52
SGCE-207ENST00000447873 ADA2Q9NZK5 511 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 C3orf18Q9UK00 162 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 RNF103-CHMP3A0A140T963 221 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 TCRBV16S1A1N1A0A5B0 115 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 GSC2O15499 205 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 DNAJC8O75937 253 aaPredicted RBP18.28■□□□□ 0.52
SGCE-207ENST00000447873 SLITRK5O94991 958 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 TCN2P20062 427 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 CD82P27701 267 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 CHI3L1P36222 383 aaPredicted RBP18.28■□□□□ 0.52
SGCE-207ENST00000447873 CCT3P49368 545 aaKnown RBP18.28■□□□□ 0.52
SGCE-207ENST00000447873 SLC7A2P52569 658 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 EFNA3P52797 238 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 EMP2P54851 167 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 MTPNP58546 118 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 C6orf163Q5TEZ5 329 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 ANGPTL8Q6UXH0 198 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 BNC2Q6ZN30 1099 aaPredicted RBP18.28■□□□□ 0.52
SGCE-207ENST00000447873 SZRD1Q7Z422 152 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 OR8J3Q8NGG0 315 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 RIT1Q92963 219 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 FAM122AQ96E09 287 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 ELP4Q96EB1 424 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 CDRT15Q96T59 188 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 THTPAQ9BU02 230 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 CRB3Q9BUF7 120 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 THUMPD3Q9BV44 507 aaKnown RBP18.28■□□□□ 0.52
SGCE-207ENST00000447873 TRIM8Q9BZR9 551 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 TRIM4Q9C037 500 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 NRSN2Q9GZP1 204 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 TPT1P8Q9HAU6 139 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 C3orf14Q9HBI5 128 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 L3MBTL1Q9Y468 752 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 NEUROG3Q9Y4Z2 214 aa18.28■□□□□ 0.52
SGCE-207ENST00000447873 SYNDIG1LA6NDD5 238 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 CDRT15L2A8MXV6 281 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 EVPLLA8MZ36 301 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 CLIC1O00299 241 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 TNNI3P19429 210 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 MC3RP41968 323 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 MRPS35P82673 323 aaKnown RBP18.27■□□□□ 0.52
SGCE-207ENST00000447873 PRR5P85299 388 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 ZNF628Q5EBL2 1059 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 RABL3Q5HYI8 236 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 FAAH2Q6GMR7 532 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 IGF2-ASQ6U949 168 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 TMEM64Q6YI46 380 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 GALNT12Q8IXK2 581 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 SLC15A3Q8IY34 581 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 ZFP90Q8TF47 636 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 METTL21AQ8WXB1 218 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 MAGED4Q96JG8 741 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 CADM1Q9BY67 442 aaKnown RBP18.27■□□□□ 0.52
SGCE-207ENST00000447873 PNO1Q9NRX1 252 aaKnown RBP18.27■□□□□ 0.52
SGCE-207ENST00000447873 ZCCHC3Q9NUD5 404 aaKnown RBP18.27■□□□□ 0.52
SGCE-207ENST00000447873 ACSL6Q9UKU0 697 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 PADI2Q9Y2J8 665 aa18.27■□□□□ 0.52
SGCE-207ENST00000447873 PLOD2O00469 737 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 ALOX12BO75342 701 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 PPIBP23284 216 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 PGM1P36871 562 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 FOXC1Q12948 553 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 PRICKLE4Q2TBC4 344 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 BHLHB9Q6PI77 547 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 DGAT2L6Q6ZPD8 337 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 TMEM151BQ8IW70 566 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 ENDOVQ8N8Q3 282 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 SFXN5Q8TD22 340 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 ZNF675Q8TD23 568 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 DOK4Q8TEW6 326 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 CT55Q8WUE5 264 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 TMEM125Q96AQ2 219 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 MOAP1Q96BY2 351 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 FAM120BQ96EK7 910 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 CPPED1Q9BRF8 314 aaPredicted RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 DDX18Q9NVP1 670 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 MAT2BQ9NZL9 334 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 PRPF19Q9UMS4 504 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 PTRH2Q9Y3E5 179 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 AK5Q9Y6K8 562 aa18.26■□□□□ 0.51
SGCE-207ENST00000447873 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.26■□□□□ 0.51
SGCE-207ENST00000447873 EMC8O43402 210 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 RAD1O60671 282 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 KLF7O75840 302 aaPredicted RBP18.25■□□□□ 0.51
SGCE-207ENST00000447873 KRT75O95678 551 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 CYC1P08574 325 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 RAB40ALP0C0E4 278 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 GALNSP34059 522 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 PRKAG1P54619 331 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 TP53BP2Q13625 1128 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 SELPLGQ14242 412 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 PUM1Q14671 1186 aaKnown RBP eCLIP18.25■□□□□ 0.51
SGCE-207ENST00000447873 TRMT12Q53H54 448 aaKnown RBP18.25■□□□□ 0.51
SGCE-207ENST00000447873 FAM111BQ6SJ93 734 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 VWA5B2Q8N398 1253 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 OR7G2Q8NG99 324 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 OR2Y1Q8NGV0 311 aa18.25■□□□□ 0.51
SGCE-207ENST00000447873 PNPT1Q8TCS8 783 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms