RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 GRPEL2Q8TAA5 225 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 LRTOMTQ8WZ04 291 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PGAM5Q96HS1 289 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CACNG4Q9UBN1 327 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PLAGL1Q9UM63 463 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 HS3ST3A1Q9Y663 406 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PRH1P02810 166 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF43P17038 809 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 BPIP17213 487 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CEBPBP17676 345 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CCNOP22674 350 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 YAP1P46937 504 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ROR2Q01974 943 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GRIN2CQ14957 1233 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 MDGA1Q8NFP4 955 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR52P1PQ8NH57 321 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SPRYD4Q8WW59 207 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ATOH1Q92858 354 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 TOE1Q96GM8 510 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 IL4I1Q96RQ9 567 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ITPAQ9BY32 194 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 METTL8Q9H825 291 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SLC39A1Q9NY26 324 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 MYADML2A6NDP7 307 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CD3GP09693 182 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 APLNRP35414 380 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GSK3BP49841 420 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 RTL6Q6ICC9 239 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PAQR7Q86WK9 346 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 HSH2DQ96JZ2 352 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PIP5K1AQ99755 562 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 LMF2Q9BU23 707 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 BCAS3Q9H6U6 928 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 MEAF6Q9HAF1 191 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PAPPAQ13219 1627 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF638Q14966 1978 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 H0YAE9 185 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZBTB11O95625 1053 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 POU2F1P14859 743 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SPIN3Q5JUX0 258 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 C6orf136Q5SQH8 315 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ANKRD54Q6NXT1 300 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PNCKQ6P2M8 343 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR2L2Q8NH16 312 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 RTP4Q96DX8 246 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 HDAC8Q9BY41 377 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 EPHX3Q9H6B9 360 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZDHHC2Q9UIJ5 367 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 LAMA4Q16363 1823 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CASC3O15234 703 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ACOX3O15254 700 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 EEDO75530 441 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 FDXRP22570 491 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GPLD1P80108 840 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR14A16Q8NHC5 309 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 L3HYPDHQ96EM0 354 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CSNK1G1Q9HCP0 422 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PGAP2Q9UHJ9 254 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GNB5O14775 395 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 FLRT2O43155 660 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 GSTT2P0CG29 244 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 RHDQ02161 417 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ZFP69Q49AA0 526 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 CLEC12AQ5QGZ9 265 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 CARM1Q86X55 608 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF595Q8IYB9 648 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 OR1J2Q8NGS2 313 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 CREB3L1Q96BA8 519 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 PEBP4Q96S96 227 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 WDR77Q9BQA1 342 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-204ENST00000446349 MOV10Q9HCE1 1003 aaKnown RBP8.15□□□□□ -1.1
PTPN3-204ENST00000446349 BRD7Q9NPI1 651 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ACAD8Q9UKU7 415 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 SCAMP2O15127 329 aaKnown RBP8.15□□□□□ -1.1
PTPN3-204ENST00000446349 LRRTM2O43300 516 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ENTPD1P49961 510 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 PUDPQ08623 228 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 FRS2Q8WU20 508 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 STON2Q8WXE9 905 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TM9SF2Q99805 663 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TRPV4Q9HBA0 871 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 RXFP3Q9NSD7 469 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 MTMR10Q9NXD2 777 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 CPNE7Q9UBL6 633 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TBC1D24Q9ULP9 559 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 DHDHQ9UQ10 334 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 PRKD3O94806 890 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 GCH1P30793 250 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TUBB3Q13509 450 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 PTPRRQ15256 657 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms