RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ARGFXA6NJG6 315 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SRRM3A6NNA2 597 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 A8MUI8 341 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 CAPN14A8MX76 684 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 MYO1GB0I1T2 1018 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SOCS6O14544 535 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 RFXANKO14593 260 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 EFSO43281 561 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 DNAJB5O75953 348 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SORBS2O94875 1100 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 ESRRAP11474 423 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 MSX2P35548 267 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SOX18P35713 384 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 CHI3L1P36222 383 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 ERFP50548 548 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCBP4P57723 403 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF155Q12901 538 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 RCAN2Q14206 197 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 TLR1Q15399 786 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 MAPKAPK3Q16644 382 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SMU1Q2TAY7 513 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 DEFB109BQ30KR1 87 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 COLEC12Q5KU26 742 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 COX20Q5RI15 118 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 METTL21CQ5VZV1 264 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 PAPD4Q6PIY7 484 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 KIRREL2Q6UWL6 708 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 R3HCC1LQ7Z5L2 792 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 CPEB2Q7Z5Q1 589 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 DHDDSQ86SQ9 333 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 DTX1Q86Y01 620 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC44A2Q8IWA5 706 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 FAM9CQ8IZT9 166 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 C10orf111Q8N326 155 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR5D16Q8NGK9 328 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR2Y1Q8NGV0 311 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 PTPMT1Q8WUK0 201 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 RIT1Q92963 219 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 NCLNQ969V3 563 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 KIAA1143Q96AT1 154 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 FKBP10Q96AY3 582 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 COQ8BQ96D53 544 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 LRFN5Q96NI6 719 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR1F2PQ96R84 312 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 GAL3ST4Q96RP7 486 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 PRPF18Q99633 342 aaKnown RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 NUDT9Q9BW91 350 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 BHLHE41Q9C0J9 482 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC52A3Q9NQ40 469 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SERHLQ9NQF3 203 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 SIRT3Q9NTG7 399 aaPredicted RBP7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 C14orf105Q9NVL8 296 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 MAP10Q9P2G4 905 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 PSME2Q9UL46 239 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 NDUFAF1Q9Y375 327 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 FER1L5A0AVI2 2057 aa7.05□□□□□ -1.28
SF3A3P1-201ENST00000446317 IGLV3-12A0A075B6K2 115 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 IGKV3D-11A0A0A0MRZ8 115 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TRBV11-1A0A0K0K1C0 115 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TCRBV16S1A1N1A0A5B0 115 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TERTO14746 1132 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MAN1A2O60476 641 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SCN2BO60939 215 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CREG1O75629 220 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 T-ENOLP0DO92 83 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ACPPP15309 386 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 STT3AP46977 705 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 HSD17B7P56937 341 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SRSF11Q05519 484 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 Q0VFX4 171 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MGAT2Q10469 447 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCOLCEQ15113 449 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PRICKLE4Q2TBC4 344 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 BTBD16Q32M84 506 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 C11orf91Q3C1V1 193 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF628Q5EBL2 1059 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RABL3Q5HYI8 236 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 C6orf163Q5TEZ5 329 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 B3GNTL1Q67FW5 361 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DESI1Q6ICB0 168 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TNFAIP8L2Q6P589 184 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF517Q6ZMY9 492 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 QSOX2Q6ZRP7 698 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MSRB3Q8IXL7 192 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CACTIN-AS1Q8N1I8 211 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SIRT6Q8N6T7 355 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 FAM156AQ8NDB6 213 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR5M3Q8NGP4 307 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC2A12Q8TD20 617 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 GTF2H4Q92759 462 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 GATA6Q92908 595 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 FGF11Q92914 225 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RAB8BQ92930 207 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TESCQ96BS2 214 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RBM18Q96H35 190 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NSL1Q96IY1 281 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ITCHQ96J02 903 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms