RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RP1L1Q8IWN7 2480 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-207ENST00000445181 NPIPB8E9PQR5 432 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 ITGA10O75578 1167 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 SNUPNO95149 360 aaKnown RBP22.24■■□□□ 1.15
C9orf3-207ENST00000445181 CBX6O95503 412 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 CYB561P49447 251 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 WDR4P57081 412 aaKnown RBP22.24■■□□□ 1.15
C9orf3-207ENST00000445181 RPL38P63173 70 aaKnown RBP22.24■■□□□ 1.15
C9orf3-207ENST00000445181 OR1C1Q15619 314 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 FAM180BQ6P0A1 224 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 RNF111Q6ZNA4 994 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 ZNF781Q8N8C0 355 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 OR8K3Q8NH51 312 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 PRR7Q8TB68 274 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 ATP6V1G3Q96LB4 118 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 PSMG3-AS1Q96PY0 264 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 VIPAS39Q9H9C1 493 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 CXorf21Q9HAI6 301 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 MIEF1Q9NQG6 463 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 LRFN1Q9P244 771 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 ENTPD4Q9Y227 616 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 LRRK2Q5S007 2527 aa22.24■■□□□ 1.15
C9orf3-207ENST00000445181 WWP2O00308 870 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 CDK2AP1O14519 115 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 LSM1O15116 133 aaKnown RBP22.23■■□□□ 1.15
C9orf3-207ENST00000445181 PRAMEF2O60811 474 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 OR2J2O76002 312 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 IGKV3-11P04433 115 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 SSR4P51571 173 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 KIAA0040Q15053 153 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 SPINK14Q6IE38 97 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 C16orf47Q6ZP98 133 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-207ENST00000445181 ARMC10Q8N2F6 343 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 LRRC25Q8N386 305 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-207ENST00000445181 PPP3R2Q96LZ3 170 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 C5orf34Q96MH7 638 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 SIGLEC12Q96PQ1 595 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 CCT7Q99832 543 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 BRINP2Q9C0B6 783 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 MYNNQ9NPC7 610 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 MYOTQ9UBF9 498 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 WBP11Q9Y2W2 641 aaKnown RBP22.23■■□□□ 1.15
C9orf3-207ENST00000445181 YARS2Q9Y2Z4 477 aaKnown RBP22.23■■□□□ 1.15
C9orf3-207ENST00000445181 TMED5Q9Y3A6 229 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 RAP2CQ9Y3L5 183 aa22.23■■□□□ 1.15
C9orf3-207ENST00000445181 SEMA7AO75326 666 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 CD46P15529 392 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 DDCP20711 480 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 BST1Q10588 318 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 ATP6AP1LQ52LC2 224 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 RFTN2Q52LD8 501 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 ZNF766Q5HY98 468 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 ZNF468Q5VIY5 522 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 IKBIPQ70UQ0 350 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 SLC29A4Q7RTT9 530 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 SAMD14Q8IZD0 417 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 CNRIP1Q96F85 164 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 BARD1Q99728 777 aaKnown RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 KLHL1Q9NR64 748 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 AGPAT4Q9NRZ5 378 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 EHD3Q9NZN3 535 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-207ENST00000445181 ESPL1Q14674 2120 aa22.22■■□□□ 1.15
C9orf3-207ENST00000445181 CROCCQ5TZA2 2017 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 ATP6AP2A0A1C7CYW4 349 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 TMEM200CA6NKL6 621 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 PEX11AO75192 247 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 ATP6AP2O75787 350 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 ATP1B1P05026 303 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 TRHRP34981 398 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-207ENST00000445181 HLCSP50747 726 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 RPL14P50914 215 aaKnown RBP22.21■■□□□ 1.15
C9orf3-207ENST00000445181 HK2P52789 917 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 PDCD2Q16342 344 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-207ENST00000445181 XKR7Q5GH72 579 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 FAM71E1Q6IPT2 247 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 TICAM1Q8IUC6 712 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 TRIM42Q8IWZ5 723 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 C9orf40Q8IXQ3 194 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 KIRREL3Q8IZU9 778 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 ASB15Q8WXK1 588 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 BBS4Q96RK4 519 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 GAL3ST4Q96RP7 486 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 SORT1Q99523 831 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 C20orf27Q9GZN8 174 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 SLC35C2Q9NQQ7 365 aa22.21■■□□□ 1.15
C9orf3-207ENST00000445181 ANKUB1A6NFN9 424 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 OR6C76A6NM76 312 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 CT62P0C5K7 136 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 GP1BBP13224 206 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 TACR1P25103 407 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 MAPK1P28482 360 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 SSTR4P31391 388 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 PTGER1P34995 402 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 SLC37A1P57057 533 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 TTMPQ5BVD1 217 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 ATG16L1Q676U5 607 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 RPUSD3Q6P087 351 aaKnown RBP22.2■■□□□ 1.14
C9orf3-207ENST00000445181 CCDC116Q8IYX3 515 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 VWA5B2Q8N398 1253 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms