RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GALNT5Q7Z7M9 940 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 ZNF605Q86T29 641 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 ALDH16A1Q8IZ83 802 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 SIX5Q8N196 739 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 CSNK1A1LQ8N752 337 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 CHDHQ8NE62 594 aaPredicted RBP14.77□□□□□ -0.04
SNX13-204ENST00000444712 NUP43Q8NFH3 380 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 OR10G2Q8NGC3 310 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 OR4C15Q8NGM1 316 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 BARD1Q99728 777 aaKnown RBP14.77□□□□□ -0.04
SNX13-204ENST00000444712 TREX2Q9BQ50 279 aaPredicted RBP14.77□□□□□ -0.04
SNX13-204ENST00000444712 GABARAPL3Q9BY60 117 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 RBM38Q9H0Z9 239 aaKnown RBP14.77□□□□□ -0.04
SNX13-204ENST00000444712 ADNPQ9H2P0 1102 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 SCN3AQ9NY46 2000 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 COLQQ9Y215 455 aaPredicted RBP14.77□□□□□ -0.04
SNX13-204ENST00000444712 GMPPBQ9Y5P6 360 aa14.77□□□□□ -0.04
SNX13-204ENST00000444712 GOLGA4Q13439 2230 aaKnown RBP14.77□□□□□ -0.05
SNX13-204ENST00000444712 SZT2Q5T011 3432 aa14.77□□□□□ -0.05
SNX13-204ENST00000444712 LOC105369274A0A096LPK9 316 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 LOC102723532A0A0G2JNH3 316 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 A0A0G2JPF8 293 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 CCDC160A6NGH7 325 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 HNRNPCL2B2RXH8 293 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 HNRNPCL3B7ZW38 293 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 UBXN7O94888 489 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 WNT1P04628 370 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 IFI6P09912 130 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 CCDC159P0C7I6 412 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 C8orf89P0DMQ9 161 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 HNRNPCL4P0DMR1 293 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 PVRP15151 417 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 TNFRSF1BP20333 461 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 CDH3P22223 829 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 EEF1B2P24534 225 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 ELK4P28324 431 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 LSSP48449 732 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 NUP107P57740 925 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 SMIM11AP58511 58 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 ISL1P61371 349 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 HNRNPKP61978 463 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNX13-204ENST00000444712 LASP1Q14847 261 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 LAPTM4AQ15012 233 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 GPR19Q15760 415 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 DUSP7Q16829 419 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 ATAD3BQ5T9A4 648 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 USP53Q70EK8 1073 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 GPR141Q7Z602 305 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 TSPYL5Q86VY4 417 aaPredicted RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 OR4N4Q8N0Y3 316 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 FBLIM1Q8WUP2 373 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 KLHL6Q8WZ60 621 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 NCSTNQ92542 709 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 ZNF566Q969W8 418 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 MAGED4Q96JG8 741 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 COL21A1Q96P44 957 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 CDX2Q99626 313 aaPredicted RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 TRIM45Q9H8W5 580 aaPredicted RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 ZNF556Q9HAH1 456 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 NTMQ9P121 344 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 SOX1O00570 391 aaPredicted RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 MITFO75030 526 aaPredicted RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 EIF2S1P05198 315 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 CRHBPP24387 322 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 IL5RAQ01344 420 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 CD47Q08722 323 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 NPRL3Q12980 569 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 MAPK11Q15759 364 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 SYPL1Q16563 259 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 FAM92BQ6ZTR7 304 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 TAGAPQ8N103 731 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 OR5D16Q8NGK9 328 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 OR9A2Q8NGT5 310 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 LMX1AQ8TE12 382 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 PHF10Q8WUB8 498 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 APOBEC4Q8WW27 367 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 CLDN23Q96B33 292 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 MS4A4EQ96PG1 132 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 PITX2Q99697 317 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 TUBA1CQ9BQE3 449 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 ACTRT3Q9BYD9 372 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 KLHL25Q9H0H3 589 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 PAPOLBQ9NRJ5 636 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 PTGFRNQ9P2B2 879 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 KCND3Q9UK17 655 aa14.76□□□□□ -0.05
SNX13-204ENST00000444712 NDRG4Q9ULP0 352 aaKnown RBP14.76□□□□□ -0.05
SNX13-204ENST00000444712 WASHC1A8K0Z3 465 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 CASC3O15234 703 aaKnown RBP14.75□□□□□ -0.05
SNX13-204ENST00000444712 CCNB2O95067 398 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 PAX7P23759 505 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 GSTT1P30711 240 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 MC3RP41968 323 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 XKP51811 444 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 MAPK10P53779 464 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 CXCR4P61073 352 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 RUNX2Q13950 521 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 ZBED5Q49AG3 693 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 COLEC12Q5KU26 742 aa14.75□□□□□ -0.05
SNX13-204ENST00000444712 IER2Q9BTL4 223 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms