RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 WNT4P56705 351 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZNF91Q05481 1191 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CHIT1Q13231 466 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 C17orf107Q6ZR85 190 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GPR26Q8NDV2 337 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 UBTD2Q8WUN7 234 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TSNAXQ99598 290 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 MIXL1Q9H2W2 232 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 I6L893 689 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 ARPC5O15511 151 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZNF254O75437 659 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TCRBP04435 133 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 AHCYP23526 432 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GPR15P49685 360 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 AGFG1P52594 562 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 SERINC3Q13530 473 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PDSS1Q5T2R2 415 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MROH8Q9H579 483 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PPP1R3EQ9H7J1 279 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SGCEO43556 437 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 SLC25A27O95847 323 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ECDO95905 644 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 TPBGQ13641 420 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 HECTD3Q5T447 861 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ARMC12Q5T9G4 340 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NBPF12Q5TAG4 269 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 RNLSQ5VYX0 342 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CTU1Q7Z7A3 348 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 KLHDC8BQ8IXV7 354 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZNF334Q9HCZ1 680 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 RPS6KB2Q9UBS0 482 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZAR1LA6NP61 321 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NDUFA2O43678 99 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 RASGRP1O95267 797 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 B3GALT4O96024 378 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GLAP06280 429 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 THP07101 528 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SMIM10L2AP0DMW4 78 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SMIM10L2BP0DMW5 78 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TNFRSF1BP20333 461 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 RAB3BP20337 219 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SELENOWP63302 87 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NAE1Q13564 534 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 LIN54Q6MZP7 749 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ATAD1Q8NBU5 361 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TNFAIP8L1Q8WVP5 186 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ARHGAP39Q9C0H5 1083 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ABHD16BQ9H3Z7 469 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MPC2O95563 127 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 XCR1P46094 333 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZNF613Q6PF04 617 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CYSLTR2Q9NS75 346 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GJA3Q9Y6H8 435 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 IFNA4P05014 189 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 LPLP06858 475 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GPX2P18283 190 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CCR6P51684 374 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CLCN7P51798 805 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 RBBP4Q09028 425 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GPR155Q7Z3F1 870 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FAM181AQ8N9Y4 354 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 DDOQ99489 341 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NIPSNAP1Q9BPW8 284 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GOLGA2P5Q9HBQ8 144 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PPT2Q9UMR5 302 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PEX10O60683 326 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CPEP16870 476 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ELK1P19419 428 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 EPHA5P54756 1037 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FGL1Q08830 312 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 KAT2AQ92830 837 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 C7orf34Q96L11 122 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OR4K3Q96R72 315 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OSER1Q9NX31 292 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PRKAG2Q9UGJ0 569 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OARD1Q9Y530 152 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SULT1C2O00338 296 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SEMG1P04279 462 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SPOUT1Q5T280 376 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 METTL11BQ5VVY1 283 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OR5M3Q8NGP4 307 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ADAMTS19Q8TE59 1207 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 KCTD12Q96CX2 325 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FBXO44Q9H4M3 255 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MYOZ2Q9NPC6 264 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 WNT10BO00744 389 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GIPRP48546 466 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 POLR2GP62487 172 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERC1-201ENST00000443617 HBMQ6B0K9 141 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms