RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CD160O95971 181 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 WNT1P04628 370 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 EIF2S1P05198 315 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RFPL3SP0C7P2 107 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRSS56P0CW18 603 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 UROSP10746 265 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCL5P13501 91 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CYP4B1P13584 511 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 UQCRBP14927 111 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 LBPP18428 481 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 XRCC1P18887 633 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TSPAN8P19075 237 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPX3P22352 226 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS3P23396 243 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 EEF1DP29692 281 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 EIF2DP41214 584 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CSKP41240 450 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PTGER3P43115 390 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMD8P48556 350 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CSNK1DP48730 415 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ERFP50548 548 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS6KA3P51812 740 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 THOP1P52888 689 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADARP55265 1226 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH13P55290 713 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PKNOX1P55347 436 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC37A1P57057 533 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPL26P61254 145 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 AP1S1P61966 158 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OLR1P78380 273 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARF5P84085 180 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MS4A2Q01362 244 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CACNG1Q06432 222 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 GRIK2Q13002 908 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH18Q13634 790 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ALKBH1Q13686 389 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CEACAM7Q14002 265 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR4D1Q15615 310 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRIP10Q15642 601 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MPPE1Q53F39 396 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CTSL3PQ5NE16 218 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARMC12Q5T9G4 340 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OGFRL1Q5TC84 451 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 LYPLAL1Q5VWZ2 237 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 LPCAT4Q643R3 524 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 REP15Q6BDI9 236 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLEC6AQ6EIG7 209 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDC73Q6P1J9 531 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZFP1Q6P2D0 407 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MTFR2Q6P444 385 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM81Q6P7N7 255 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM154Q6P9G4 183 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 LINGO4Q6UY18 593 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 HACD2Q6Y1H2 254 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS27LQ71UM5 84 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 RTL10Q7L3V2 364 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPATA19Q7Z5L4 167 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SNX20Q7Z614 316 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM150AQ86TG1 271 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM126BQ8IUX1 230 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPR65Q8IYL9 337 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 STK40Q8N2I9 435 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PCDH20Q8N6Y1 951 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 EXD3Q8N9H8 876 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SIDT2Q8NBJ9 832 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM116Q8NCL8 245 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR56A4Q8NGH8 313 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ELP5Q8TE02 316 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRPC4APQ8TEL6 797 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 C2CD4CQ8TF44 421 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TWIST2Q8WVJ9 160 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 IGFBPL1Q8WX77 278 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CNOT9Q92600 299 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MRPS31Q92665 395 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TOP1MTQ969P6 601 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ROPN1LQ96C74 230 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 INTS12Q96CB8 462 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF689Q96CS4 500 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 C19orf60Q96EN9 201 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MED30Q96HR3 178 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF479Q96JC4 524 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLHL15Q96M94 604 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 BIRC8Q96P09 236 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CYP2S1Q96SQ9 504 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPR21Q99679 349 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 HOPXQ9BPY8 73 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 C19orf43Q9BQ61 176 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 HGH1Q9BTY7 390 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC25A23Q9BV35 468 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 NPLQ9BXD5 320 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 NUSAP1Q9BXS6 441 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 P2RY12Q9H244 342 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 AAMDCQ9H7C9 122 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAGEE1Q9HCI5 957 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 BPIFA1Q9NP55 256 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms