RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC37A1P57057 533 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 TBL3Q12788 808 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 EBPQ15125 230 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 UNC50Q53HI1 259 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 PRAMEF20Q5VT98 475 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 NCCRP1Q6ZVX7 275 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 FGD2Q7Z6J4 655 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 C1orf52Q8N6N3 182 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 OR5M3Q8NGP4 307 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 METTL6Q8TCB7 284 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 PHF10Q8WUB8 498 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 UCN3Q969E3 161 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 KLHL29Q96CT2 875 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 JSRP1Q96MG2 331 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 BRINP2Q9C0B6 783 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 TP63Q9H3D4 680 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 LDAHQ9H6V9 325 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 CXorf21Q9HAI6 301 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 PFDN4Q9NQP4 134 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 BOKQ9UMX3 212 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 NINQ8N4C6 2090 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 EXPH5Q8NEV8 1989 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 PKDREJQ9NTG1 2253 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 ATP6AP2A0A1C7CYW4 349 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CAPN14A8MX76 684 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 MANBAO00462 879 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 GLRA3O75311 464 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 ULK1O75385 1050 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CRCPO75575 148 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 ATP6AP2O75787 350 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CLDN14O95500 239 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 SNRPB2P08579 225 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 HSD3B1P14060 373 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 COX6B1P14854 86 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 PORP16435 677 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 KRT15P19012 456 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 AGAP20933 346 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 HSD3B2P26439 372 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 GRNP28799 593 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 PIGAP37287 484 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 NRG3P56975 720 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CSTF3Q12996 717 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 LCP2Q13094 533 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 TCHHL1Q5QJ38 904 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CHERPQ8IWX8 916 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 TMEM151AQ8N4L1 468 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CCNYL1Q8N7R7 359 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CA5BP1Q8WTZ4 195 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 TUBA8Q9NY65 449 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 VPS29Q9UBQ0 182 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 B4GALT7Q9UBV7 327 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 DCDC2Q9UHG0 476 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 PSME2Q9UL46 239 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 PCDHA9Q9Y5H5 950 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 CREBBPQ92793 2442 aa18.32■□□□□ 0.52
SHROOM1-204ENST00000440118 ABCA12Q86UK0 2595 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 GNG14A0A1W2PPG7 69 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 A0A1W2PS29 197 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 NPIPA2E9PIF3 369 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 NPIPA3F8WFD2 350 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 MYL2P10916 166 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 IMPDH1P20839 514 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 MAGEA5P43359 124 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 SLCO1A2P46721 670 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 TMED10P49755 219 aaKnown RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 NR0B1P51843 470 aaKnown RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 PRKAA2P54646 552 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 GALNT1Q10472 559 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF630Q2M218 657 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF791Q3KP31 576 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 TMEM251Q8N6I4 163 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 CCDC63Q8NA47 563 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 LRRN4CLQ8ND94 238 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 OR10G3Q8NGC4 313 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 SDCCAG3Q96C92 435 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 CCDC126Q96EE4 140 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 SMC6Q96SB8 1091 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 TXLNGYQ9BZA5 131 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 OR10A5Q9H207 317 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 ZDHHC11Q9H8X9 412 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 RYDENQ9NUL5 291 aaKnown RBP18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 BCAP29Q9UHQ4 241 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF780BQ9Y6R6 833 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 MYO9AB2RTY4 2548 aa18.31■□□□□ 0.52
SHROOM1-204ENST00000440118 TP53I11O14683 189 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 GLSO94925 669 aaPredicted RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 LRATO95237 230 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 NADKO95544 446 aaPredicted RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 ENO1P06733 434 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 FBXO45P0C2W1 286 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 CSNK2A2P19784 350 aaPredicted RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 FEN1P39748 380 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 ACSM2AQ08AH3 577 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 RPS6KA2Q15349 733 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 ACSM2BQ68CK6 577 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 TMEM211Q6ICI0 200 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 SLC48A1Q6P1K1 146 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 VWA5B2Q8N398 1253 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 FBXW8Q8N3Y1 598 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms