RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 OR10G2Q8NGC3 310 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 XAGE5Q8WWM1 108 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PROX1Q92786 737 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ELP4Q96EB1 424 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 APOL4Q9BPW4 351 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TREX2Q9BQ50 279 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 NPLQ9BXD5 320 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 KLHL25Q9H0H3 589 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ACER3Q9NUN7 267 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PTTG2Q9NZH5 202 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 NTMQ9P121 344 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 DAPP1Q9UN19 280 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 GMPPBQ9Y5P6 360 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SLC22A7Q9Y694 548 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TDRD6O60522 2096 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 GOLGA4Q13439 2230 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 B4DGG1 531 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 H3BSA7 217 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 AHCYL1O43865 530 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CPNE6O95741 557 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 HMGN2P05204 90 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CCDC159P0C7I6 412 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ALPPL2P10696 532 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 JUNBP17275 347 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TLX1P31314 330 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 MC3RP41968 323 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 FASLGP48023 281 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SH3BGRP55822 239 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 NUP107P57740 925 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 RACK1P63244 317 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 IL1RL1Q01638 556 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 NPRL3Q12980 569 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 LASP1Q14847 261 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ELOCQ15369 112 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SYPL1Q16563 259 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 MEP1AQ16819 746 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 MICAQ29983 383 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ZBED5Q49AG3 693 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TMEM107Q6UX40 140 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 KRT73Q86Y46 540 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 LRRC25Q8N386 305 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 OR5D16Q8NGK9 328 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 OR9A2Q8NGT5 310 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TMIGD2Q96BF3 282 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF354BQ96LW1 612 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 COL21A1Q96P44 957 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SPATA5L1Q9BVQ7 753 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 BTBD2Q9BX70 525 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 RSPO3Q9BXY4 272 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ADNPQ9H2P0 1102 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SEMA6CQ9H3T2 930 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 UCK1Q9HA47 277 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SCN3AQ9NY46 2000 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CCDC88CQ9P219 2028 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SEC14L3Q9UDX4 400 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 FBXL21Q9UKT6 434 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 MRPS2Q9Y399 296 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TMEM131Q92545 1883 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 LILRA5A6NI73 299 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 J3KTA2 159 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 SLC1A7O00341 560 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 B4GAT1O43505 415 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 ABCB7O75027 752 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 GADD45GO95257 159 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CYP4B1P13584 511 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
SMAD3-202ENST00000439724 PTGER1P34995 402 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 MAN2A2P49641 1150 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 PRKAG1P54619 331 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CXCR4P61073 352 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 PPP1CAP62136 330 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 IL5RAQ01344 420 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 FUT5Q11128 374 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CDK5R2Q13319 367 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 KLHL35Q6PF15 583 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 KCTD8Q6ZWB6 473 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 USP53Q70EK8 1073 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 TSPYL5Q86VY4 417 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF761Q86XN6 746 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-202ENST00000439724 GKN2Q86XP6 184 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 SPEM1Q8N4L4 309 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 SLC5A8Q8N695 610 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CSNK1A1LQ8N752 337 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 NUP43Q8NFH3 380 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 OR4K14Q8NGD5 310 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 MAGED4Q96JG8 741 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 HRASLS5Q96KN8 279 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 DHRS1Q96LJ7 313 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 CSF3RQ99062 836 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 FEVQ99581 238 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 TUBA1CQ9BQE3 449 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 POLR1BQ9H9Y6 1135 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms