RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SH2B3Q9UQQ2 575 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 NINQ8N4C6 2090 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 CR1P17927 2039 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 UQCRHLA0A096LP55 91 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 LRRC3CA6NJW4 275 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 SHISA8B8ZZ34 492 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ZNF354AO60765 605 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 RCBTB2O95199 551 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 IFNA16P05015 189 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ENO3P13929 434 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 NPPBP16860 134 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 GDF1P27539 372 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 PPP2R1BP30154 601 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 AHRP35869 848 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 HSD17B3P37058 310 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 RAB8AP61006 207 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 FOXF2Q12947 444 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 SLC13A2Q13183 592 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 GAB1Q13480 694 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 SLC29A2Q14542 456 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ZNF791Q3KP31 576 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 HP1BP3Q5SSJ5 553 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 TEDDM1Q5T9Z0 273 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 CES3Q6UWW8 571 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 UBE2R2Q712K3 238 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ZNF595Q8IYB9 648 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 GSPT2Q8IYD1 628 aaKnown RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 DND1Q8IYX4 353 aaKnown RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 SLC15A4Q8N697 577 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 OTUD6BQ8N6M0 293 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 C9orf106Q8NAJ2 232 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 TRPV3Q8NET8 790 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 OR14A16Q8NHC5 309 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ZBED6CLQ96FA7 236 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 CFAP36Q96G28 342 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 WDYHV1Q96HA8 205 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 JSRP1Q96MG2 331 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 HAUS8Q9BT25 410 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 MED18Q9BUE0 208 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 TMEM109Q9BVC6 243 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ROPN1BQ9BZX4 212 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 ROPN1Q9HAT0 212 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 INTS10Q9NVR2 710 aaKnown RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 KLHL28Q9NXS3 571 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 CORO1CQ9ULV4 474 aaPredicted RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 MRPS33Q9Y291 106 aaKnown RBP10.18□□□□□ -0.78
CSTF3-203ENST00000438862 CRYL1Q9Y2S2 319 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 CLDN16Q9Y5I7 305 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 IKBKGQ9Y6K9 419 aa10.18□□□□□ -0.78
CSTF3-203ENST00000438862 USF3Q68DE3 2245 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 TGFBR3LH3BV60 316 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 TRAPPC6AO75865 159 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 ACSL3O95573 720 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 HPNP05981 417 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 CLCN7P51798 805 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 HSP90AA5PQ58FG0 334 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 PRAMEF20Q5VT98 475 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 TRMT10BQ6PF06 316 aaKnown RBP10.17□□□□□ -0.78
CSTF3-203ENST00000438862 SCIMPQ6UWF3 145 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 CYHR1Q6ZMK1 362 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 TDRPQ86YL5 185 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 CILP2Q8IUL8 1156 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 C2CD4AQ8NCU7 369 aaPredicted RBP10.17□□□□□ -0.78
CSTF3-203ENST00000438862 SLC22A8Q8TCC7 542 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 PTPMT1Q8WUK0 201 aaPredicted RBP10.17□□□□□ -0.78
CSTF3-203ENST00000438862 UBLCP1Q8WVY7 318 aaPredicted RBP10.17□□□□□ -0.78
CSTF3-203ENST00000438862 ROBO4Q8WZ75 1007 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 UCN3Q969E3 161 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 CPNE1Q99829 537 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 SGPP1Q9BX95 441 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 NPLQ9BXD5 320 aaPredicted RBP10.17□□□□□ -0.78
CSTF3-203ENST00000438862 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 PROK2Q9HC23 129 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 PSD3Q9NYI0 1048 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 VTI1BQ9UEU0 232 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 PACSIN3Q9UKS6 424 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 FBXO5Q9UKT4 447 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 COMMD10Q9Y6G5 202 aa10.17□□□□□ -0.78
CSTF3-203ENST00000438862 ANKRD33BA6NCL7 494 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 DYNC1I1O14576 645 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 CYP4B1P13584 511 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 CNTFP26441 200 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 CPOXP36551 454 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 GP5P40197 560 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 HNF4AP41235 474 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 FAM27E3Q08E93 113 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 ASPHQ12797 758 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 NAE1Q13564 534 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 UAP1Q16222 522 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-203ENST00000438862 KBTBD12Q3ZCT8 623 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 TBCELQ5QJ74 424 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 GRTP1Q5TC63 336 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 LGSNQ5TDP6 509 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 AGTRAPQ6RW13 159 aa10.16□□□□□ -0.78
CSTF3-203ENST00000438862 LRIG3Q6UXM1 1119 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms