RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF480Q8WV37 535 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ASB15Q8WXK1 588 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF566Q969W8 418 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RFT1Q96AA3 541 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF419Q96HQ0 510 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ERMAPQ96PL5 475 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CENPOQ9BU64 300 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC6A16Q9GZN6 736 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FBXO8Q9NRD0 319 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 UCKL1Q9NWZ5 548 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RNF186Q9NXI6 227 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NLKQ9UBE8 527 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NUFIP1Q9UHK0 495 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 HEBP2Q9Y5Z4 205 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MYO9BQ13459 2157 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 A0A1W2PQ09 198 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC35F4A4IF30 521 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 J3KTA2 159 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 M0R3H8 397 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ARHGAP33O14559 1287 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PLD2O14939 933 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PROM1O43490 865 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ACRP10323 421 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 DRD2P14416 443 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CST5P28325 142 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MAT2AP31153 395 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 EIF2DP41214 584 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 HTR3DQ70Z44 454 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM179BQ7Z7N9 219 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 JAZF1Q86VZ6 243 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 GID4Q8IVV7 300 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CELF5Q8N6W0 485 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PROKR2Q8NFJ6 384 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 POF1BQ8WVV4 589 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 AKAP1Q92667 903 aaKnown RBP eCLIP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC22A18Q96BI1 424 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 DOK1Q99704 481 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ABCG5Q9H222 651 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TTYH1Q9H313 450 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 XKR8Q9H6D3 395 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RNF121Q9H920 327 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 BRD7Q9NPI1 651 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MARCH5Q9NX47 278 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 POU2F3Q9UKI9 436 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 GPR52Q9Y2T5 361 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MED31Q9Y3C7 131 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PDCD5O14737 125 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MID1O15344 667 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TSPAN9O75954 239 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 IFNA7P01567 189 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CAPNS1P04632 268 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 C1SP09871 688 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PTNP21246 168 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CASP3P42574 277 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 GCGRP47871 477 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MRPL19P49406 292 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PRMT2P55345 433 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TAS2R43P59537 309 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF91Q05481 1191 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLAMF1Q13291 335 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PDGFRLQ15198 375 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RTN4RL1Q86UN2 441 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ACBD7Q8N6N7 88 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FAM83FQ8NEG4 500 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 C1orf216Q8TAB5 229 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 DYNC2LI1Q8TCX1 351 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TNFAIP8L1Q8WVP5 186 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RBM18Q96H35 190 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PKMYT1Q99640 499 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MMP28Q9H239 520 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MTG2Q9H4K7 406 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NDUFAF4Q9P032 175 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ACSL5Q9ULC5 683 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ITM2BQ9Y287 266 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PCDHGA6Q9Y5G7 932 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TRAV6A0A075B6T7 132 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FEZF1A0PJY2 475 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CD8B2A6NJW9 211 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 GFRA2O00451 464 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 STK25O00506 426 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 EMC8O43402 210 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PRKYO43930 277 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ZDHHC11BP0C7U3 371 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CD8BP10966 210 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 DDCP20711 480 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FSHRP23945 695 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TGFBR2P37173 567 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 WDR5P61964 334 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RHAGQ02094 409 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 EIF2B5Q13144 721 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NKG7Q16617 165 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FAM214AQ32MH5 1076 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 LEXMQ3ZCV2 418 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC30A6Q6NXT4 461 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ERN2Q76MJ5 926 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 GET4Q7L5D6 327 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms