RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CTHRC1Q96CG8 243 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SNF8Q96H20 258 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SENP5Q96HI0 755 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 HS6ST2Q96MM7 605 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 KRT12Q99456 494 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 OSBPL8Q9BZF1 889 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 RASSF4Q9H2L5 321 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 COPS7AQ9UBW8 275 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PDE10AQ9Y233 779 aa11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 URADA6NGE7 173 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 EIF3FO00303 357 aaPredicted RBP11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PLOD2O00469 737 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 VAPBO95292 243 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CD8AP01732 235 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PF4P02776 101 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 GYPCP04921 128 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SERPINB3P29508 390 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 AHRP35869 848 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 MSH2P43246 934 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 FBXW4P57775 412 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SQLEQ14534 574 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 DGAT2L6Q6ZPD8 337 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TRIM42Q8IWZ5 723 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CAVIN3Q969G5 261 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 MANSC1Q9H8J5 431 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 EML4Q9HC35 981 aaKnown RBP11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TEX10Q9NXF1 929 aaPredicted RBP11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 FETUBQ9UGM5 382 aa11.08□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 RYR3Q15413 4870 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 IGKV3-11P04433 115 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PAMP19021 973 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PTNP21246 168 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 HNRNPH1P31943 449 aaKnown RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 LIM2P55344 173 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 IQCB1Q15051 598 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 RBBP5Q15291 538 aaKnown RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PGGHGQ32M88 737 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TTLL9Q3SXZ7 439 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 RPS26P11Q5JNZ5 115 aaPredicted RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PCID2Q5JVF3 399 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 ADAM5Q6NVV9 412 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CENPUQ71F23 418 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CPNE9Q8IYJ1 553 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 RFLNBQ8N5W9 214 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SPPL2AQ8TCT8 520 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 NEIL2Q969S2 332 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 FBXW5Q969U6 566 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PPWD1Q96BP3 646 aaKnown RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 ZNF845Q96IR2 970 aaPredicted RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 FAR2Q96K12 515 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TSNARE1Q96NA8 513 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 GAL3ST4Q96RP7 486 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 HAUS8Q9BT25 410 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 NTMT1Q9BV86 223 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 NPLQ9BXD5 320 aaPredicted RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PIF1Q9H611 641 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 KCNS2Q9ULS6 477 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 MRPS33Q9Y291 106 aaKnown RBP11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 EFR3BQ9Y2G0 817 aa11.07□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CLOCKO15516 846 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 HCRTR2O43614 444 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SNX4O95219 450 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 VENTXO95231 258 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CRHP06850 196 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SERPINA6P08185 405 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CCND1P24385 295 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CHMP24386 653 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CERS1P27544 350 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 GMPRP36959 345 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CASP3P42574 277 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 LHX2P50458 406 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SESN2P58004 480 aaPredicted RBP11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 REEP5Q00765 189 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 FUT7Q11130 342 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 CTBP1Q13363 440 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TIGD3Q6B0B8 471 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 ZNF549Q6P9A3 640 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 P4HA3Q7Z4N8 544 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 SDCCAG8Q86SQ7 713 aaPredicted RBP11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 PRUNE1Q86TP1 453 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 OR4N5Q8IXE1 308 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 DND1Q8IYX4 353 aaKnown RBP11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TBC1D19Q8N5T2 526 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 TRPV3Q8NET8 790 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 RDH11Q8TC12 318 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 HTRA1Q92743 480 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 REPS1Q96D71 796 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 MS4A6EQ96DS6 147 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 MFSD3Q96ES6 412 aa11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 NAT10Q9H0A0 1025 aaKnown RBP11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 BARX1Q9HBU1 254 aaPredicted RBP11.06□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 LOC100289279A0A1B0GTE1 492 aa11.05□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 A0A1W2PP18 115 aa11.05□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 ELOA3DA6NLF2 546 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-IT1-201ENST00000437983 ERI3O43414 337 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms