RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 OAS1P00973 400 aaKnown RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 INHAP05111 366 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 DPEP1P16444 411 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CORO1AP31146 461 aaKnown RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 NIPAL4Q0D2K0 466 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 IRF4Q15306 451 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 SGCBQ16585 318 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 HIST2H3PS2Q5TEC6 136 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 DCUN1D3Q8IWE4 304 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 OR5B17Q8NGF7 314 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 KCTD13Q8WZ19 329 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 FOXRED1Q96CU9 486 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 AK1P00568 194 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 NFYAP23511 347 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PLA2G16P53816 162 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 MELKQ14680 651 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PCGF3Q3KNV8 242 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 AGAP7PQ5VUJ5 663 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 LIPJQ5W064 366 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 GOLGA7Q7Z5G4 137 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PAQR8Q8TEZ7 354 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 TM9SF4Q92544 642 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 HMCESQ96FZ2 354 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF75AQ96N20 296 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CDHR4A6H8M9 788 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 OTOL1A6NHN0 477 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ANGPTL7O43827 346 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 UBE2KP61086 200 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 NKX3-2P78367 333 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PLP2Q04941 152 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM198Q66K66 360 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CCM2Q9BSQ5 444 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 BRF2Q9HAW0 419 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 TCRBV7S2A1N4TA0A589 114 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 SOX14O95416 240 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 SHMT1P34896 483 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 OPRL1P41146 370 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 FABP6P51161 128 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 EMC10Q5UCC4 262 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ENPP7Q6UWV6 458 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ACOT11Q8WXI4 607 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 DAZAP1Q96EP5 407 aaKnown RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ABRACLQ9P1F3 81 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PPLO60437 1756 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 LOC285095A0A1B0GVY8 99 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 IL4RP24394 825 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 EDNRBP24530 442 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 NFYBP25208 207 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 GGT2P36268 569 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CDCA2Q69YH5 1023 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 SLC18B1Q6NT16 456 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 KANSL1Q7Z3B3 1105 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CPT1CQ8TCG5 803 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 LHPPQ9H008 270 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-209ENST00000437951 DLGAP4Q9Y2H0 992 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ATRNO75882 1429 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 IRAK2O43187 625 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CH25HO95992 272 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 GAAP10253 952 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 TPMTP51580 245 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 POU4F3Q15319 338 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ACTBL2Q562R1 376 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 UBE2NLQ5JXB2 153 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■■ 64.7
PTCH1-209ENST00000437951 SGTBQ96EQ0 304 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM59LQ9UK28 342 aa11.06□□□□□ -0.64
PTCH1-209ENST00000437951 CD8B2A6NJW9 211 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 RNF212BA8MTL3 300 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 MAGEB4O15481 346 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-209ENST00000437951 FKTNO75072 461 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 DIRAS1O95057 198 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 CD8BP10966 210 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 PTPN2P17706 415 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 AKR1C2P52895 323 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 ERVK-16P61578 105 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 ERN2Q76MJ5 926 aaKnown RBP11.05□□□□□ -0.64
PTCH1-209ENST00000437951 LDB1Q86U70 411 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-209ENST00000437951 IGFN1Q86VF2 1251 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 RNF130Q86XS8 419 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 ZFAND1Q8TCF1 268 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 PITHD1Q9GZP4 211 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-209ENST00000437951 TDP1Q9NUW8 608 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 NCDNQ9UBB6 729 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 TOX4O94842 621 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 RAB6AP20340 208 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 CA5AP35218 305 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 SCAPQ12770 1279 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 MALLQ13021 153 aa11.05□□□□□ -0.64
PTCH1-209ENST00000437951 P4HA3Q7Z4N8 544 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms