RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C10orf90Q96M02 699 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 TREX2Q9BQ50 279 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-216ENST00000437340 C3orf14Q9HBI5 128 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 BCL2L10Q9HD36 194 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 ACER3Q9NUN7 267 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 MS4A12Q9NXJ0 267 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 KCMF1Q9P0J7 381 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 GPC6Q9Y625 555 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-216ENST00000437340 ARRDC5A6NEK1 342 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 AXIN1O15169 862 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 P2RX6O15547 441 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 B3GALT2O43825 422 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 CYP4B1P13584 511 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 PXNP49023 591 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-216ENST00000437340 CRISP3P54108 245 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 DUSP2Q05923 314 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 LSAMPQ13449 338 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 PUM1Q14671 1186 aaKnown RBP eCLIP24.22■■□□□ 1.47
CPNE1-216ENST00000437340 GPR19Q15760 415 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 EXOC3L2Q2M3D2 409 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 PRAMEF8Q5VWM4 474 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 PRAMEF7Q5VXH5 474 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 RNF44Q7L0R7 432 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 KRT73Q86Y46 540 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 LGI4Q8N135 537 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 GPR32P1Q8NGA4 272 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 BBS10Q8TAM1 723 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 RERGQ96A58 199 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-216ENST00000437340 CLDN23Q96B33 292 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 FEVQ99581 238 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 DNAAF2Q9NVR5 837 aaKnown RBP24.22■■□□□ 1.47
CPNE1-216ENST00000437340 TRPC4Q9UBN4 977 aa24.22■■□□□ 1.47
CPNE1-216ENST00000437340 PRAMEF27A3QJZ7 478 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ENO4A6NNW6 628 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 HMGN2P05204 90 aaKnown RBP24.21■■□□□ 1.47
CPNE1-216ENST00000437340 NR2F1P10589 423 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 PMS2P3Q13401 168 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 SYPL1Q16563 259 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF750Q32MQ0 723 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 CYP27C1Q4G0S4 372 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 OOSP2Q86WS3 158 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 FRMD1Q8N878 549 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 OR5D16Q8NGK9 328 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 KLHL6Q8WZ60 621 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 HRASLS5Q96KN8 279 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF354BQ96LW1 612 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 SLC6A18Q96N87 628 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 SPATA5L1Q9BVQ7 753 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 TPSD1Q9BZJ3 242 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 POFUT2Q9Y2G5 429 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 J3KTA2 159 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 NDUFS2O75306 463 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ANGPTL1O95841 491 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 C8orf89P0DMQ9 161 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 CPN2P22792 545 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 NUP107P57740 925 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 TMEM107Q6UX40 140 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 SLC5A8Q8N695 610 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 OR52J3Q8NH60 311 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ZDHHC1Q8WTX9 485 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 RLN3Q8WXF3 142 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ELP4Q96EB1 424 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 CXorf21Q9HAI6 301 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 EVA1BQ9NVM1 165 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 SEC14L3Q9UDX4 400 aa24.21■■□□□ 1.47
CPNE1-216ENST00000437340 ASNA1O43681 348 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 GADD45GO95257 159 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 ALOX12P18054 663 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 AGXTP21549 392 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 TLX1P31314 330 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-216ENST00000437340 LSSP48449 732 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 PRKAG1P54619 331 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 RPP38P78345 283 aaKnown RBP24.2■■□□□ 1.46
CPNE1-216ENST00000437340 HHEXQ03014 270 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 LASP1Q14847 261 aaKnown RBP24.2■■□□□ 1.46
CPNE1-216ENST00000437340 RAB39AQ14964 217 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 ZNF420Q8TAQ5 688 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-216ENST00000437340 ZCCHC10Q8TBK6 192 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 PHF10Q8WUB8 498 aaKnown RBP24.2■■□□□ 1.46
CPNE1-216ENST00000437340 COL21A1Q96P44 957 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 BTBD2Q9BX70 525 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 PCED1AQ9H1Q7 454 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 LYRM4Q9HD34 91 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 DAPP1Q9UN19 280 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 NAALAD2Q9Y3Q0 740 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 HCN4Q9Y3Q4 1203 aa24.2■■□□□ 1.46
CPNE1-216ENST00000437340 OR5K3A6NET4 321 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 H0YGG7 62 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 JUNDP17535 347 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 CD27P26842 260 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 LIM2P55344 173 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 ARF3P61204 181 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 DEFB134Q4QY38 66 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 FRMPD2BQ6IN97 320 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 SPEM1Q8N4L4 309 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 FAM160A2Q8N612 972 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 MAGED4Q96JG8 741 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 LRRC61Q9BV99 259 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 NTMQ9P121 344 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 ENOPH1Q9UHY7 261 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms