RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 MBD3L3A6NE82 208 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 MBD3L5A6NJ08 208 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CD8B2A6NJW9 211 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 WASHC1A8K0Z3 465 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SUPT3HB4E1H0 165 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 DVL2O14641 736 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SUPT3HO75486 399 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 FAM155BO75949 473 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SEMA3DO95025 777 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 LRATO95237 230 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 LTA4HP09960 611 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SLC35E2P0CK97 266 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 EPB42P16452 691 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 KLK2P20151 261 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 BMP5P22003 454 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CRABP2P29373 138 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CDK9P50750 372 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 RAP1GDS1P52306 607 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 WNT3P56703 355 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 RPS13P62277 151 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 MRPS25P82663 173 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 FUT7Q11130 342 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 FOXD4Q12950 439 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CUL3Q13618 768 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 DDX39BQ13838 428 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 ZNF267Q14586 743 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 DAZAP2Q15038 168 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 KBTBD12Q3ZCT8 623 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 GRTP1Q5TC63 336 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 LIPJQ5W064 366 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 NSUN5P2Q63ZY6 315 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 BICRALQ6AI39 1079 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 VASNQ6EMK4 673 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 TMEM81Q6P7N7 255 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 C3orf62Q6ZUJ4 267 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CDC20BQ86Y33 519 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 TAGAPQ8N103 731 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 MBD3L2Q8NHZ7 208 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 WDR20Q8TBZ3 569 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 DOK4Q8TEW6 326 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 ADIPOR1Q96A54 375 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 TP53INP1Q96A56 240 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 RILPQ96NA2 401 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 MTERF1Q99551 399 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 TIMP4Q99727 224 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 NAPGQ99747 312 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 CENPKQ9BS16 269 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 SNX15Q9NRS6 342 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 ALKBH4Q9NXW9 302 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 JKAMPQ9P055 326 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 RNF14Q9UBS8 474 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 FOXD3Q9UJU5 478 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 PLEKHA6Q9Y2H5 1048 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 C15orf41Q9Y2V0 281 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 PCDHGA11Q9Y5H2 935 aa10.03□□□□□ -0.8
SPTLC1P4-201ENST00000435997 C15orf38-AP3S2A0A0A6YYH1 394 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 HMX2A2RU54 273 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 FAM187AA6NFU0 413 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 GLOD5A6NK44 160 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 SYCE1LA8MT33 242 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 FOXE1O00358 373 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 RAD51CO43502 376 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 OR10H2O60403 315 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 SNX4O95219 450 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TACR1P25103 407 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 PTX3P26022 381 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 GDF1P27539 372 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 SSTR4P31391 388 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 UQCRC1P31930 480 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TRPC1P48995 793 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 ALDH18A1P54886 795 aaKnown RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 FBXW4P57775 412 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 SORDQ00796 357 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 NAB1Q13506 487 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 PCBP2Q15366 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 DCST1Q5T197 706 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TMEM64Q6YI46 380 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TBC1D1Q86TI0 1168 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 NUDT13Q86X67 352 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 PM20D2Q8IYS1 436 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 LIX1Q8N485 282 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TEX9Q8N6V9 391 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 ZNF615Q8N8J6 731 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 L3MBTL4Q8NA19 623 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 DIO2Q92813 273 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 UCN3Q969E3 161 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 NXNL1Q96CM4 212 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 TMEM41AQ96HV5 264 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 JSRP1Q96MG2 331 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 ANGPTL4Q9BY76 406 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 ACTR8Q9H981 624 aa10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 MTRF1LQ9UGC7 380 aaKnown RBP10.02□□□□□ -0.81
SPTLC1P4-201ENST00000435997 FETUBQ9UGM5 382 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms