RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 F10P00742 488 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 CT62P0C5K7 136 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 TACR1P25103 407 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 FEN1P39748 380 aaKnown RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 HK2P52789 917 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 SLC37A1P57057 533 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 ERVK-8P63133 956 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 MAP4K2Q12851 820 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 INPP5JQ15735 1006 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 PRICKLE4Q2TBC4 344 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 GALNT12Q8IXK2 581 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 C9orf40Q8IXQ3 194 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 SAMD14Q8IZD0 417 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 RAB3IL1Q8TBN0 382 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 THAP3Q8WTV1 239 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 MIB2Q96AX9 1013 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 CTHRC1Q96CG8 243 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF764Q96H86 408 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 PPP3R2Q96LZ3 170 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF639Q9UID6 485 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 ERVK-19Q9WJR5 959 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 FLNCQ14315 2725 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 HIVEP3Q5T1R4 2406 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 OR6C76A6NM76 312 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 PRAMEF2O60811 474 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 ITGA10O75578 1167 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 NEURL1O76050 574 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 SDC1P18827 310 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 HLCSP50747 726 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 RPL14P50914 215 aaKnown RBP17.04■□□□□ 0.32
HLA-F-220ENST00000434407 FOXK1P85037 733 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 C2orf80Q0P641 193 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 PRSS53Q2L4Q9 553 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF227Q86WZ6 799 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF615Q8N8J6 731 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 OR5L2Q8NGL0 311 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 CPT1CQ8TCG5 803 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 MGARPQ8TDB4 240 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 DOK4Q8TEW6 326 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 SNRNP40Q96DI7 357 aaKnown RBP17.04■□□□□ 0.32
HLA-F-220ENST00000434407 SCMH1Q96GD3 660 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 EGLN2Q96KS0 407 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 SIGLEC12Q96PQ1 595 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 CNPPD1Q9BV87 410 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 RYDENQ9NUL5 291 aaKnown RBP17.04■□□□□ 0.32
HLA-F-220ENST00000434407 THAP1Q9NVV9 213 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 MAT2BQ9NZL9 334 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF780BQ9Y6R6 833 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 TENM4Q6N022 2769 aa17.04■□□□□ 0.32
HLA-F-220ENST00000434407 J3QKU1 62 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 TBX19O60806 448 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 JUNP05412 331 aaKnown RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 BCKDHAP12694 445 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 CYB561P49447 251 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 ST13P50502 369 aaKnown RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 RPL38P63173 70 aaKnown RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 OR1C1Q15619 314 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 INAQ16352 499 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 GALNTL6Q49A17 601 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 PRR30Q53SZ7 412 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 PIGGQ5H8A4 983 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 C6orf136Q5SQH8 315 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 FAM180BQ6P0A1 224 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 RNF111Q6ZNA4 994 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 OR7G1Q8NGA0 311 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 SUN3Q8TAQ9 357 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF675Q8TD23 568 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 C19orf60Q96EN9 201 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 LIN28AQ9H9Z2 209 aaKnown RBP17.03■□□□□ 0.32
HLA-F-220ENST00000434407 PFDN4Q9NQP4 134 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 ANKRD10Q9NXR5 420 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 LRFN1Q9P244 771 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 NTNG1Q9Y2I2 539 aa17.03■□□□□ 0.32
HLA-F-220ENST00000434407 EXPH5Q8NEV8 1989 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 NINQ8N4C6 2090 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 ATP6AP2A0A1C7CYW4 349 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 MYO1GB0I1T2 1018 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 HMGB1P1B2RPK0 211 aaPredicted RBP17.02■□□□□ 0.32
HLA-F-220ENST00000434407 KLF11O14901 512 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 SKAP2O75563 359 aaPredicted RBP17.02■□□□□ 0.32
HLA-F-220ENST00000434407 ATP6AP2O75787 350 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 OR2J2O76002 312 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 NT5EP21589 574 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 SSTR4P31391 388 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 SSR4P51571 173 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 EBPQ15125 230 aaKnown RBP17.02■□□□□ 0.32
HLA-F-220ENST00000434407 SMU1Q2TAY7 513 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF766Q5HY98 468 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 SPINK14Q6IE38 97 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 FAM111BQ6SJ93 734 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 TICAM1Q8IUC6 712 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 TRIM42Q8IWZ5 723 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 GPALPP1Q8IXQ4 340 aa17.02■□□□□ 0.32
HLA-F-220ENST00000434407 VWA5B2Q8N398 1253 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms