RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 TMEM201Q5SNT2 666 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 MFSD4BQ5TF39 518 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 LIPKQ5VXJ0 399 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 MEDAGQ5VYS4 303 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 SPRED2Q7Z698 418 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 OR8H2Q8N162 312 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 NATD1Q8N6N6 113 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 PIK3R3Q92569 461 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 RGMAQ96B86 450 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 COX14Q96I36 57 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 QRFPRQ96P65 431 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 C17orf62Q9BQA9 187 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 POLR2J2Q9GZM3 115 aaKnown RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 TPK1Q9H3S4 243 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 SMURF1Q9HCE7 757 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 SNTG1Q9NSN8 517 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 CRNNQ9UBG3 495 aaPredicted RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 P2RX2Q9UBL9 471 aa11.17□□□□□ -0.62
CD44-209ENST00000433892 WBP11Q9Y2W2 641 aaKnown RBP11.17□□□□□ -0.62
CD44-209ENST00000433892 ASNA1O43681 348 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 SNX4O95219 450 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 TP53P04637 393 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 CLCNKAP51800 687 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 REEP5Q00765 189 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 ARHGAP19Q14CB8 494 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 METRNLQ641Q3 311 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 LRRTM4Q86VH4 590 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 TBC1D19Q8N5T2 526 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 NANOGP1Q8N7R0 232 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MACROD1Q9BQ69 325 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 YIPF4Q9BSR8 244 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 FUZQ9BT04 418 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 DPH7Q9BTV6 452 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MND1Q9BWT6 205 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 GLIPR2Q9H4G4 154 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 RERGLQ9H628 205 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 FBXL12Q9NXK8 326 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 CXXC1Q9P0U4 656 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 ACAD8Q9UKU7 415 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 INSL6Q9Y581 213 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 A0A075B6Q4 140 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 IGLON5A6NGN9 336 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 APOA1P02647 267 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 RPN2P04844 631 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 CHRM5P08912 532 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 ALPPL2P10696 532 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MMP11P24347 488 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 HOXD12P35452 270 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 GSTM5P46439 218 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 GJA8P48165 433 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 CDK3Q00526 305 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MXD1Q05195 221 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 KRR1Q13601 381 aaKnown RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 NDUFAF5Q5TEU4 345 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 FAM46CQ5VWP2 391 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 OR4C11Q6IEV9 310 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 ZER1Q7Z7L7 766 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 KRT73Q86Y46 540 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 TP53I13Q8NBR0 393 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 GPR151Q8TDV0 419 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 SLC35B4Q969S0 331 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 SLC35G5Q96KT7 338 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 AMDHD1Q96NU7 426 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 GPA33Q99795 319 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 ACSS1Q9NUB1 689 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 KLHL3Q9UH77 587 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 MN1Q10571 1320 aaPredicted RBP11.16□□□□□ -0.62
CD44-209ENST00000433892 HEATR5BQ9P2D3 2071 aa11.16□□□□□ -0.62
CD44-209ENST00000433892 A0A1W2PRQ8 180 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 MYL12BO14950 172 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 LATO43561 262 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 GSTT2P0CG29 244 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TIE1P35590 1138 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 BMPR1AP36894 532 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 CASP3P42574 277 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 SSR2P43308 183 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 NCBP2P52298 156 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD44-209ENST00000433892 SMIM11AP58511 58 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 CSNK1G2P78368 415 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD44-209ENST00000433892 GINS1Q14691 196 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 GPR19Q15760 415 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ACSM5Q6NUN0 579 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ADAMTSL4Q6UY14 1074 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 IQCHQ86VS3 1027 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 LAX1Q8IWV1 398 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 SCAIQ8N9R8 606 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 PROKR2Q8NFJ6 384 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms