RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TEX13CA0A0J9YWL9 993 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 A0A1W2PRG6 482 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 MPC2O95563 127 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 TGFB1P01137 390 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 PRPH2P23942 346 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 NSG1P42857 185 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 ASMTP46597 345 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 HMGA2P52926 109 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 PFN3P60673 137 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 PURAQ00577 322 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 GGTA1PQ4G0N0 100 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 MACC1Q6ZN28 852 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 THOC6Q86W42 341 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 PPCDCQ96CD2 204 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 METTL2AQ96IZ6 378 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC12A9Q9BXP2 914 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 KCNN2Q9H2S1 579 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 MVB12BQ9H7P6 319 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 FZD3Q9NPG1 666 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 RNF181Q9P0P0 153 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 SRRDQ9UH36 339 aa10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 DIMT1Q9UNQ2 313 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-202ENST00000433297 HRO43593 1189 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 CD160O95971 181 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 LALBAP00709 142 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 H1F0P07305 194 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 CORO1AP31146 461 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 SPAM1P38567 509 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 LIMS1P48059 325 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ACLYP53396 1101 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF770Q6IQ21 691 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 RFT1Q96AA3 541 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 C11orf24Q96F05 449 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF582Q96NG8 517 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 SAMD11Q96NU1 681 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 OR51J1Q9H342 316 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 HEXA-AS1Q9H8Q6 139 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 MCCC2Q9HCC0 563 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 TAS2R7Q9NYW3 318 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ZFR2Q9UPR6 939 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 POM121CA8CG34 1229 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 H3BNC9 293 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 PSMA3P25788 255 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ELAVL4P26378 380 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 CSNK1DP48730 415 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 HSF2Q03933 536 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 COL28A1Q2UY09 1125 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF791Q3KP31 576 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 GPR139Q6DWJ6 353 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 RTL4Q6ZR62 310 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 QSOX2Q6ZRP7 698 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 OXR1Q8N573 874 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 TOE1Q96GM8 510 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ZFP3Q96NJ6 502 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 WFDC6Q9BQY6 131 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 IMP3Q9NV31 184 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 PTGFRNQ9P2B2 879 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 ADAM30Q9UKF2 790 aa10.96□□□□□ -0.66
HMGCS1-202ENST00000433297 BRCA2P51587 3418 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 IGLV3-27P01718 113 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 KLKB1P03952 638 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 HOXD4P09016 255 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OR56A5P0C7T3 313 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OR12D1P0DN82 309 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 DRD5P21918 477 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 GIFP27352 417 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC6A1P30531 599 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 GPR68Q15743 365 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 CRB2Q5IJ48 1285 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 FAM92BQ6ZTR7 304 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 ADGRF3Q8IZF5 1079 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MMP21Q8N119 569 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SAMD12Q8N8I0 201 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC7A13Q8TCU3 470 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 ASB11Q8WXH4 323 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 ST8SIA2Q92186 375 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 ST8SIA4Q92187 359 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 COQ10AQ96MF6 247 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SORCS2Q96PQ0 1159 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 KCNJ15Q99712 375 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OR51B5Q9H339 312 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 HCN3Q9P1Z3 774 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 GULP1Q9UBP9 304 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MGAT4BQ9UQ53 548 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 A0A1W2PPL8 197 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 A0A1W2PRB8 838 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 M0R233 179 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 QSOX1O00391 747 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC9A3R1O14745 358 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SEPT4O43236 478 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms