RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C2orf92A0A1B0GVN3 265 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 SYCE1LA8MT33 242 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 SUSD5O60279 629 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 NME6O75414 186 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 ALDOAP04075 364 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 KLK1P06870 262 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 FBXO45P0C2W1 286 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 BMP5P22003 454 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 PTX3P26022 381 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 TYK2P29597 1187 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 IST1P53990 364 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 DUSP8Q13202 625 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 FAM83EQ2M2I3 478 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 LIPJQ5W064 366 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 FBXW8Q8N3Y1 598 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 LIX1Q8N485 282 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 RELL2Q8NC24 303 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 WDR20Q8TBZ3 569 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 ATP6V1E2Q96A05 226 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 HBEGFQ99075 208 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 MRPL1Q9BYD6 325 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 EHD3Q9NZN3 535 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 BOKQ9UMX3 212 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 C2CD3Q4AC94 2353 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 PPP6CO00743 305 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 GNB5O14775 395 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 KLHL2O95198 593 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 NT5EP21589 574 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 SERPINB3P29508 390 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 DCST1Q5T197 706 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 FAM111BQ6SJ93 734 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ULK2Q8IYT8 1036 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 RAB17Q9H0T7 212 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 NINJ2Q9NZG7 142 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 AKAP6Q13023 2319 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 FOXO6A8MYZ6 492 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 H0YIV9 168 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 WDR1O75083 606 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 SERPINB1P30740 379 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ACAP2Q15057 778 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 EIPR1Q53HC9 387 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 TTC19Q6DKK2 380 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 NUDT13Q86X67 352 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 LRRC25Q8N386 305 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ADCY4Q8NFM4 1077 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ART5Q96L15 291 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 RILPQ96NA2 401 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ANKRA2Q9H9E1 313 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CXorf21Q9HAI6 301 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 LYARQ9NX58 379 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CRIM1Q9NZV1 1036 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 KCNN3Q9UGI6 736 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 ADGRE2Q9UHX3 823 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 CAMK2AQ9UQM7 478 aa13.07□□□□□ -0.32
SMARCE1-205ENST00000431889 PRRC2AP48634 2157 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 SYNDIG1LA6NDD5 238 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 HCN1O60741 890 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 CLDN9O95484 217 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 PIK3R1P27986 724 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 FEN1P39748 380 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 MASP1P48740 699 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 XKP51811 444 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 CCNG1P51959 295 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 CDH13P55290 713 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 PHEXP78562 749 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 CAV1Q03135 178 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 DUSP2Q05923 314 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 PCDH1Q08174 1060 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 ILF2Q12905 390 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 LTB4RQ15722 352 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 NTRK2Q16620 822 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 WIPI1Q5MNZ9 446 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms