RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GPR148Q8TDV2 347 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 MRPL24Q96A35 216 aaKnown RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 C14orf79Q96F83 325 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 EPSTI1Q96J88 318 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 C1orf147Q96MC9 270 aaPredicted RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 NSMCE2Q96MF7 247 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 FOXN4Q96NZ1 517 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 FUNDC2Q9BWH2 189 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 ERVK-6Q9BXR3 956 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 PUS3Q9BZE2 481 aaKnown RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 TRIM9Q9C026 710 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 ABCG8Q9H221 673 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 DCTPP1Q9H773 170 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 NT5DC2Q9H857 520 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 DBNDD1Q9H9R9 158 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 Q9HAA7 133 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 HPS4Q9NQG7 708 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.72□□□□□ -2.13
CDC40-204ENST00000431461 DDX28Q9NUL7 540 aaKnown RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 RAI14Q9P0K7 980 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 THAP10Q9P2Z0 257 aaPredicted RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 HOOK1Q9UJC3 728 aaKnown RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.72□□□□□ -2.13
CDC40-204ENST00000431461 DIMT1Q9UNQ2 313 aaKnown RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 MTF2Q9Y483 593 aaPredicted RBP1.72□□□□□ -2.13
CDC40-204ENST00000431461 OR1A2Q9Y585 309 aa1.72□□□□□ -2.13
CDC40-204ENST00000431461 A0A0A6YYD4 124 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 IGHV3-16A0A0C4DH30 117 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TRBV5-4A0A0C4DH59 114 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TMEM110-MUSTN1A8MSY1 372 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 E9PAM4 449 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 NPIPA2E9PIF3 369 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 K7EQG2 157 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CYB561D2O14569 222 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 MCF2LO15068 1137 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 GALR3O60755 368 aaPredicted RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 DUSP11O75319 330 aaKnown RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 KBTBD11O94819 623 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 GOT2P00505 430 aaKnown RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 CXCL10P02778 98 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 RALAP11233 206 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 IL4RP24394 825 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TMOD1P28289 359 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ATP6V1E1P36543 226 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SLC6A8P48029 635 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 FNTAP49354 379 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 EMDP50402 254 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 PRELPP51888 382 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 METAP1P53582 386 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 PEX3P56589 373 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 RPL27P61353 136 aaKnown RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 GALK2Q01415 458 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 WASHC5Q12768 1159 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SNX1Q13596 522 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 EXOSC7Q15024 291 aaKnown RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 SIX1Q15475 284 aaPredicted RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 CARTPTQ16568 116 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 MICAQ29983 383 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SNAI3Q3KNW1 292 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ANKRD55Q3KP44 614 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 GPAT3Q53EU6 434 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TOR1AIP1Q5JTV8 583 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 GOLGA7Q7Z5G4 137 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 C5orf24Q7Z6I8 188 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TAF8Q7Z7C8 310 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 TMEM110Q86TL2 294 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SLC22A16Q86VW1 577 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 KCNMB4Q86W47 210 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ABCA7Q8IZY2 2146 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 LINC00518Q8N0U6 118 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 PARP8Q8N3A8 854 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 HDDC3Q8N4P3 179 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CHCHD4Q8N4Q1 142 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 OR4L1Q8NH43 312 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 OR4A16Q8NH70 328 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 FLVCR1-AS1Q8TAF5 88 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 C11orf45Q8TAV5 145 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 KIAA1524Q8TCG1 905 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ST7LQ8TDW4 575 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SAP25Q8TEE9 199 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 AGAP11Q8TF27 550 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 KRT35Q92764 455 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SNX21Q969T3 373 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 NABP1Q96AH0 204 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ZBED6CLQ96FA7 236 aaPredicted RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 PCED1BQ96HM7 432 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CAPNS2Q96L46 248 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 C9orf85Q96MD7 179 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CPXM1Q96SM3 734 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 SOSTQ9BQB4 213 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CBWD1Q9BRT8 395 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ACPTQ9BZG2 426 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ABCG4Q9H172 646 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 IL1RAPQ9NPH3 570 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 ANO10Q9NW15 660 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 IMPAD1Q9NX62 359 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 CLEC5AQ9NY25 188 aa1.71□□□□□ -2.14
CDC40-204ENST00000431461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.71□□□□□ -2.14
CDC40-204ENST00000431461 TECRQ9NZ01 308 aaKnown RBP1.71□□□□□ -2.14
CDC40-204ENST00000431461 GALPQ9UBC7 116 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms