RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CEP295Q9C0D2 2601 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 C2orf16Q68DN1 1984 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 LOC400499M0QZD8 3231 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 MYH6P13533 1939 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZZEF1O43149 2961 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 GSTTP1A0A1W2PQM5 241 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 C5orf60A6NFR6 353 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SHISA7A6NL88 538 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 NDUFAB1O14561 156 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SMIM24O75264 130 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 VTNP04004 478 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 GSTA1P08263 222 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ANKRD34CP0C6C1 535 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 CKMT2P17540 419 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 CCNA2P20248 432 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 AHCYP23526 432 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 IL4RP24394 825 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 HOXA6P31267 233 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SERPINB6P35237 376 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 OR1G1P47890 313 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 BRWD1-AS2P59051 145 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SLC34A1Q06495 639 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 DLG1Q12959 904 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 PRKAA1Q13131 559 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 MYBPHQ13203 477 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ALX1Q15699 326 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 KIF19Q2TAC6 998 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SMUG1Q53HV7 270 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 AGAP6Q5VW22 663 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FAM46CQ5VWP2 391 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 LYSMD4Q5XG99 296 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 OR4A47Q6IF82 309 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 GALNT17Q6IS24 598 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FAM166AQ6J272 317 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 TMEM53Q6P2H8 277 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 PRSS55Q6UWB4 352 aaPredicted RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF554Q86TJ5 538 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 NLRP14Q86W24 1093 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 BATF2Q8N1L9 274 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ELMOD1Q8N336 334 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 KDM8Q8N371 416 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 STKLD1Q8NE28 680 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 LNX1Q8TBB1 728 aaPredicted RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SUN5Q8TC36 379 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FIG4Q92562 907 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF707Q96C28 371 aaPredicted RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SNF8Q96H20 258 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 TSSK2Q96PF2 358 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 TSGA13Q96PP4 275 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 MAP3K3Q99759 626 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FAM213AQ9BRX8 229 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 TRMT61BQ9BVS5 477 aaKnown RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 NUSAP1Q9BXS6 441 aaKnown RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 KRT23Q9C075 422 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZMYND12Q9H0C1 365 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ABCG4Q9H172 646 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 P2RY12Q9H244 342 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 CPVLQ9H3G5 476 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 C8orf33Q9H7E9 229 aaPredicted RBP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 PARVGQ9HBI0 331 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 PARVBQ9HBI1 364 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZFP14Q9HCL3 533 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF302Q9NR11 478 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FKBP14Q9NWM8 211 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FAM118AQ9NWS6 357 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 DCAF16Q9NXF7 216 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 C11orf21Q9P2W6 132 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 FETUBQ9UGM5 382 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 CFAP45Q9UL16 551 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 PCDHA7Q9UN72 937 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 ATP6V1DQ9Y5K8 247 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 INSL5Q9Y5Q6 135 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 MYO10Q9HD67 2058 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 GREB1Q4ZG55 1949 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 MYH15Q9Y2K3 1946 aa3.74□□□□□ -1.81
HMGB3-203ENST00000430118 SF3B1O75533 1304 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 A0A0A6YYC8 382 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 A0A1W2PPI3 338 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CFAP73A6NFT4 308 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 C4orf47A7E2U8 309 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 E7ENQ6 273 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF587BE7ETH6 402 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 I3L1I5 382 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 J3QKU1 62 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF197O14709 1029 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 RASGRF2O14827 1237 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SYNGR3O43761 229 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 IDH3BO43837 385 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SSX5O60225 188 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 DARSP14868 501 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 PSMC3P17980 439 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CDC25AP30304 524 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 HOXA11P31270 313 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 HPDP32754 393 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CSTF2P33240 577 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ABCG1P45844 678 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 OR3A3P47888 321 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 NR2C2P49116 596 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms