RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 REEP5Q00765 189 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 RPA4Q13156 261 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 AMZ2Q86W34 360 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TCEANCQ8N8B7 351 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 UCN3Q969E3 161 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TREX2Q9BQ50 279 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 MND1Q9BWT6 205 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TSSK6Q9BXA6 273 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 BARHL1Q9BZE3 327 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 RACGAP1Q9H0H5 632 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 MVB12BQ9H7P6 319 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 H7BY64 318 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 HOXC11O43248 304 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 DYRK3O43781 588 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SLITRK5O94991 958 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 DDX5P17844 614 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TIE1P35590 1138 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CCR8P51685 355 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 ARHGAP19Q14CB8 494 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SYPL1Q16563 259 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 GDPGP1Q6ZNW5 385 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SPATC1Q76KD6 591 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 KRT73Q86Y46 540 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 NANOGP1Q8N7R0 232 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 FLCNQ8NFG4 579 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 OR5K2Q8NHB8 316 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CHAC2Q8WUX2 184 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 COX14Q96I36 57 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 PRAP1Q96NZ9 151 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 QRFPRQ96P65 431 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SEC14L4Q9UDX3 406 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TRAPPC4Q9Y296 219 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 A8MU76 341 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 UGT2B17O75795 530 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TIMP1P01033 207 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 APOA1P02647 267 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 GSTT2P0CG29 244 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 GSTT2BP0CG30 244 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 OR12D1P0DN82 309 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TNNI3P19429 210 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 PSMA1P25786 263 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 SMIM11AP58511 58 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 PIN1Q13526 163 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 OCLNQ16625 522 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TMEM52BQ4KMG9 183 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TRIM69Q86WT6 500 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 IQCF1Q8N6M8 205 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 IL17RDQ8NFM7 739 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 MENTQ9BUN1 341 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ACSS1Q9NUB1 689 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 P2RX2Q9UBL9 471 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 NUMA1Q14980 2115 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 H3BQ06 376 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 M0R3H8 397 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 WWP2O00308 870 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 NDUFS4O43181 175 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 NME6O75414 186 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ADH1CP00326 375 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 EPCAMP16422 314 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC6A11P48066 632 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ELAVL3Q14576 367 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 PAQR6Q6TCH4 344 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 UBE3DQ7Z6J8 389 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TBC1D19Q8N5T2 526 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 AMER3Q8N944 861 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 PROKR2Q8NFJ6 384 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 OR5D16Q8NGK9 328 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 RGMAQ96B86 450 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TRIM43Q96BQ3 446 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 CTRCQ99895 268 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 POLR2J2Q9GZM3 115 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 NDUFB11Q9NX14 153 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TVP23BQ9NYZ1 205 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 KLHL3Q9UH77 587 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 TBC1D24Q9ULP9 559 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
SNRNP200-202ENST00000429650 RBMX2Q9Y388 322 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms