RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CREG1O75629 220 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-208ENST00000428599 LCN1P31025 176 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 SUOXP51687 545 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 STC1P52823 247 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 MAB21L1Q13394 359 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 RAB31Q13636 194 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 QPCTQ16769 361 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 CATSPEREQ5SY80 951 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 OR52E8Q6IFG1 317 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.041e-8■■■□□ 16
CTNND1-208ENST00000428599 USP53Q70EK8 1073 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 TRIM74Q86UV6 250 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 IQCKQ8N0W5 287 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 CLEC1AQ8NC01 280 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 LSM14AQ8ND56 463 aaKnown RBP8.56□□□□□ -1.04
CTNND1-208ENST00000428599 OR2T33Q8NG76 320 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 FAM46BQ96A09 425 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 LRCH3Q96II8 777 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 MS4A4AQ96JQ5 239 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 TTTY10Q9BZA0 68 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 TBCCD1Q9NVR7 557 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 XRCC1P18887 633 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-208ENST00000428599 GDF5P43026 501 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 AKR1C2P52895 323 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 KCNC4Q03721 635 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 SPATS1Q496A3 300 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 UEVLDQ8IX04 471 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 WDSUB1Q8N9V3 476 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 TMEM40Q8WWA1 233 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 SGTBQ96EQ0 304 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 WACQ9BTA9 647 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 HOXD1Q9GZZ0 328 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 XYLT2Q9H1B5 865 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 RXFP3Q9NSD7 469 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 PIAS3Q9Y6X2 628 aa8.56□□□□□ -1.04
CTNND1-208ENST00000428599 IGKV6D-21A0A0A0MT36 114 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NARSO43776 548 aaKnown RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 GJB5O95377 273 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NPPAP01160 153 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 IFNA10P01566 189 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 CD63P08962 238 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 C1GALT1C1LP0DN25 315 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF28P17035 718 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 PTGS2P35354 604 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ETV3P41162 512 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 AQP4P55087 323 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 RPP30P78346 268 aaKnown RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 MEF2AQ02078 507 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 EMX2Q04743 252 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 SLAMF1Q13291 335 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 LRFN4Q6PJG9 635 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 PIM3Q86V86 326 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 OR51G2Q8NGK0 314 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 S100PBPQ96BU1 408 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 HAO2Q9NYQ3 351 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 RNF215Q9Y6U7 377 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 LCHNA4D1U4 455 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 SLC35F4A4IF30 521 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 AGAP5A6NIR3 686 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 AURKAO14965 403 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 OR12D1P0DN82 309 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ERP29P30040 261 aaKnown RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NTSR1P30989 418 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NUDT6P53370 316 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 TLE3Q04726 772 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 EIF4HQ15056 248 aaKnown RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 LRIT3Q3SXY7 679 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 CDNFQ49AH0 187 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 TMEM201Q5SNT2 666 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 BCL2L15Q5TBC7 163 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 DCAF12L1Q5VU92 463 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 BAIAP2L2Q6UXY1 529 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 HACD2Q6Y1H2 254 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 FAM43BQ6ZT52 329 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ARL14Q8N4G2 192 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 GLYATL1Q969I3 302 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ZBTB20Q9HC78 741 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 WDR6Q9NNW5 1121 aaKnown RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NWD2Q9ULI1 1742 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 RBBP9O75884 186 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 IFNA4P05014 189 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NOVP48745 357 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 PPA1Q15181 289 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NR0B2Q15466 257 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NSDHLQ15738 373 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NTRK2Q16620 822 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF773Q6PK81 442 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 TRIM46Q7Z4K8 759 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 COMTD1Q86VU5 262 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 CLDN19Q8N6F1 224 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 NLGN4YQ8NFZ3 816 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-208ENST00000428599 KIAA1191Q96A73 305 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF559Q9BR84 538 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 RETREG1Q9H6L5 497 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 POPDC3Q9HBV1 291 aa8.55□□□□□ -1.04
CTNND1-208ENST00000428599 AP1M2Q9Y6Q5 423 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms