RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 NDUFAB1O14561 156 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SCAMP2O15127 329 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 ZFAND5O76080 213 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TGDSO95455 350 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SLC35E2P0CK97 266 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 LAMP1P11279 417 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 MC3RP41968 323 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 STT3AP46977 705 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 POLE2P56282 527 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SPANXN4Q5MJ08 99 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 MRM1Q6IN84 353 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 GALNT18Q6P9A2 607 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PAOXQ6QHF9 649 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 RPS19BP1Q86WX3 136 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 PTRH1Q86Y79 214 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 ZNF614Q8N883 585 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 C7orf57Q8NEG2 295 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 OR5L2Q8NGL0 311 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 OR9I1Q8NGQ6 314 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 OR6Y1Q8NGX8 325 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 DNAJB14Q8TBM8 379 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 NUDT8Q8WV74 236 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TMEM125Q96AQ2 219 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 OTUB1Q96FW1 271 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 METTL2AQ96IZ6 378 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 CDCP1Q9H5V8 836 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 RMND5AQ9H871 391 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 KLHL1Q9NR64 748 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PLA2G3Q9NZ20 509 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 EHD3Q9NZN3 535 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 KCNMB2Q9Y691 235 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CROCCQ5TZA2 2017 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PKD1L2Q7Z442 2459 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 IGHV1-45A0A0A0MS14 117 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 LOC100653049A0A140TA62 436 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CCDC154A6NI56 674 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SAGE2PA6NJ88 616 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GABRR3A8MPY1 467 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PCDH17O14917 1159 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 NME6O75414 186 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 KRT34O76011 436 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 C6orf47O95873 294 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 RECKO95980 971 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SERPINA7P05543 415 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GSNP06396 782 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 COX6A1P12074 109 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GSTM5P46439 218 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 NR0B1P51843 470 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 CASP9P55211 416 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 NRG3P56975 720 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PRR5P85299 388 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TBR1Q16650 682 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GKAP1Q5VSY0 366 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 FAM71E1Q6IPT2 247 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 EPGNQ6UW88 154 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 AMER2Q8N7J2 671 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 FDCSPQ8NFU4 85 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 C9orf43Q8TAL5 461 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 ASB15Q8WXK1 588 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ANKRD9Q96BM1 317 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 WBP11Q9Y2W2 641 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 HEMK1Q9Y5R4 338 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 C2orf92A0A1B0GVN3 265 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 SYNDIG1LA6NDD5 238 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PRR35P0CG20 571 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ITGAMP11215 1152 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GCGRP47871 477 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TOMM20Q15388 145 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 MAPKAPK3Q16644 382 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 GSTA3Q16772 222 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ANXA8L1Q5VT79 327 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 C16orf47Q6ZP98 133 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDC7-203ENST00000428239 PRR22Q8IZ63 422 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ZADH2Q8N4Q0 377 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 TRIML2Q8N7C3 387 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 ANKS4BQ8N8V4 417 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 OR52R1Q8NGF1 315 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 PNPT1Q8TCS8 783 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 ACTRT2Q8TDY3 377 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CNRIP1Q96F85 164 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 JSRP1Q96MG2 331 aaPredicted RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 SIKE1Q9BRV8 207 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CACYBPQ9HB71 228 aaKnown RBP6.55□□□□□ -1.36
CDC7-203ENST00000428239 TAS2R9Q9NYW1 312 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CFL2Q9Y281 166 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 CAPN7Q9Y6W3 813 aa6.55□□□□□ -1.36
CDC7-203ENST00000428239 A8MVJ9 347 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 SOCS6O14544 535 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 RFXANKO14593 260 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 COQ9O75208 318 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 REM1O75628 298 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 HPGDP15428 266 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 PCSK2P16519 638 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 POLR2JP52435 117 aaKnown RBP6.54□□□□□ -1.36
CDC7-203ENST00000428239 CLDN8P56748 225 aa6.54□□□□□ -1.36
CDC7-203ENST00000428239 RHDQ02161 417 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms