RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RPRMLQ8N4K4 120 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 MARVELD2Q8N4S9 558 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 CDYL2Q8N8U2 506 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 OR4K14Q8NGD5 310 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 SDCCAG3Q96C92 435 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 TXLNGYQ9BZA5 131 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 EPB41L4BQ9H329 900 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 CXorf21Q9HAI6 301 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 IL1RL2Q9HB29 575 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 CHST11Q9NPF2 352 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 TBK1Q9UHD2 729 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 ADAM29Q9UKF5 820 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 APCP25054 2843 aa16.97■□□□□ 0.31
PSPC1-202ENST00000427943 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 OR6C76A6NM76 312 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 NPIPA2E9PIF3 369 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 NPIPA3F8WFD2 350 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 ATP6AP2O75787 350 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 COX6B1P14854 86 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 NT5EP21589 574 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 GALNSP34059 522 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 EMC4Q5J8M3 183 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 SLC22A10Q63ZE4 541 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 PAOXQ6QHF9 649 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 TMEM64Q6YI46 380 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 RGS9BPQ6ZS82 235 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 SLC15A4Q8N697 577 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 OR10G3Q8NGC4 313 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 OR5M3Q8NGP4 307 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 PAQR8Q8TEZ7 354 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 TRIM44Q96DX7 344 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-202ENST00000427943 TP63Q9H3D4 680 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-202ENST00000427943 BRF2Q9HAW0 419 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 SH2D2AQ9NP31 389 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-202ENST00000427943 TNFRSF10DQ9UBN6 386 aa16.96■□□□□ 0.31
PSPC1-202ENST00000427943 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.96■□□□□ 0.31
PSPC1-202ENST00000427943 FBN2P35556 2912 aa16.96■□□□□ 0.3
PSPC1-202ENST00000427943 MYO9AB2RTY4 2548 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 C2orf92A0A1B0GVN3 265 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 FBXO45P0C2W1 286 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 PYGBP11216 843 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 CPMP14384 443 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 ATP5F1P24539 256 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-202ENST00000427943 XKP51811 444 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 KCNJ2P63252 427 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 TBL3Q12788 808 aaKnown RBP16.95■□□□□ 0.3
PSPC1-202ENST00000427943 C6orf163Q5TEZ5 329 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 GPRIN3Q6ZVF9 776 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 C1orf52Q8N6N3 182 aaKnown RBP16.95■□□□□ 0.3
PSPC1-202ENST00000427943 ZNF441Q8N8Z8 693 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 OR5M9Q8NGP3 310 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 SMC6Q96SB8 1091 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 PNPLA3Q9NST1 481 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 PCDHA9Q9Y5H5 950 aa16.95■□□□□ 0.3
PSPC1-202ENST00000427943 CHCHD2Q9Y6H1 151 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-202ENST00000427943 DCHS2Q6V1P9 2916 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 CREBBPQ92793 2442 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 C1orf226A1L170 272 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 FOXO6A8MYZ6 492 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 MANBAO00462 879 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 ERAL1O75616 437 aaKnown RBP16.94■□□□□ 0.3
PSPC1-202ENST00000427943 IGHG3P01860 377 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 CHN1P15882 459 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 TNFRSF8P28908 595 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 SERPINB3P29508 390 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 HMOX2P30519 316 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 ALDH9A1P49189 494 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 HTR6P50406 440 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 RASA2Q15283 850 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 HLA-DQA1Q5Y7H0 255 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 FAM180BQ6P0A1 224 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 SLC48A1Q6P1K1 146 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 TRILQ7L0X0 811 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 LCA5Q86VQ0 697 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 FBXW8Q8N3Y1 598 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 CA5BP1Q8WTZ4 195 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 MZB1Q8WU39 189 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 JSRP1Q96MG2 331 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-202ENST00000427943 ZNF382Q96SR6 550 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 OR10A5Q9H207 317 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 LDAHQ9H6V9 325 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 COQ3Q9NZJ6 369 aa16.94■□□□□ 0.3
PSPC1-202ENST00000427943 LRRC3CA6NJW4 275 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 GUCY1B2O75343 617 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 KRT6AP02538 564 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 KRT6BP04259 564 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 RFPL3SP0C7P2 107 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
PSPC1-202ENST00000427943 IMPDH1P20839 514 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
PSPC1-202ENST00000427943 FEN1P39748 380 aaKnown RBP16.93■□□□□ 0.3
PSPC1-202ENST00000427943 KIR3DL1P43629 444 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 KRT6CP48668 564 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 DUSP2Q05923 314 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 FUT7Q11130 342 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 CSTF3Q12996 717 aaKnown RBP16.93■□□□□ 0.3
PSPC1-202ENST00000427943 NNATQ16517 81 aa16.93■□□□□ 0.3
PSPC1-202ENST00000427943 NTRK2Q16620 822 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms