RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CCNOP22674 350 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 HLCSP50747 726 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PRPS1P60891 318 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 DCST2Q5T1A1 773 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 RCBTB1Q8NDN9 531 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 CHDHQ8NE62 594 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 LGALS12Q96DT0 336 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF317Q96PQ6 595 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PDE4DIPQ5VU43 2346 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 VSTM2BA6NLU5 285 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 NCBP2-AS2Q69YL0 99 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SHFQ7M4L6 423 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SMIM15Q7Z3B0 74 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SLC41A3Q96GZ6 507 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SUSD3Q96L08 255 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 GSCP56915 257 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 C6orf141Q5SZD1 244 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 FAM83HQ6ZRV2 1179 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM173Q86WV6 379 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PRSS58Q8IYP2 241 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PPP1R35Q8TAP8 253 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SLC22A8Q8TCC7 542 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SFXN5Q8TD22 340 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 DDIT4LQ96D03 193 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF442Q9H7R0 627 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SIRPGQ9P1W8 387 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 TRBV23OR9-2A0A075B6M9 112 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 C1orf226A1L170 272 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 P2RX6O15547 441 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 NDUFV2P19404 249 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 CD9P21926 228 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 NR4A2P43354 598 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 RCAN2Q14206 197 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 LYSMD3Q7Z3D4 306 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SGPP2Q8IWX5 399 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 UPRTQ96BW1 309 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 GALNT2Q10471 571 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 EIF4HQ15056 248 aaKnown RBP13.83□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM198Q66K66 360 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 LRRC25Q8N386 305 aaPredicted RBP13.83□□□□□ -0.19
PTPN13-203ENST00000427191 ADAMTS19Q8TE59 1207 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 MYRFLQ96LU7 910 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 DLGAP4Q9Y2H0 992 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 ST14Q9Y5Y6 855 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 A0A1W2PPW3 197 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 YJEFN3A6XGL0 299 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 B4DGG1 531 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 CSTAP01040 98 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 RFC2P35250 354 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.19
PTPN13-203ENST00000427191 PCLAFQ15004 111 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF704Q6ZNC4 412 aaPredicted RBP13.83□□□□□ -0.19
PTPN13-203ENST00000427191 MINDY1Q8N5J2 469 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.19
PTPN13-203ENST00000427191 LTN1O94822 1766 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 SHOXO15266 292 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 WDR4P57081 412 aaKnown RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 PPA1Q15181 289 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF678Q5SXM1 525 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 OR1J4Q8NGS1 313 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 FBXL20Q96IG2 436 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CCL22O00626 93 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 KIAA0513O60268 411 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 BCAS1O75363 584 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CST3P01034 146 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CD6P30203 668 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CLEC20AQ6ZU45 233 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 TICAM1Q8IUC6 712 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 DCAF4L2Q8NA75 395 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 RSC1A1Q92681 617 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 SLC25A31Q9H0C2 315 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 MINDY3Q9H8M7 445 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 MAT2AP31153 395 aaKnown RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 C14orf28Q4W4Y0 310 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 PIGRP01833 764 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 MMP2P08253 660 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 FECHP22830 423 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 DGKQP52824 942 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 GDF10P55107 478 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF674Q2M3X9 581 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 NANOGP8Q6NSW7 305 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 CCBE1Q6UXH8 406 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
PTPN13-203ENST00000427191 NANOGQ9H9S0 305 aa13.83□□□□□ -0.2
PTPN13-203ENST00000427191 C20orf202A1L168 122 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms