RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZNF451Q9Y4E5 1061 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 SPACA6W5XKT8 324 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 A0A1B0GTW7 788 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 MFN2O95140 757 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 CD247P20963 164 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 CTSKP43235 329 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 SHC2P98077 582 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 METTL25Q8N6Q8 603 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 TMEM52Q8NDY8 209 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 LRIT1Q9P2V4 623 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 SDK1Q7Z5N4 2213 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 SRPX2O60687 465 aaPredicted RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 RECKO95980 971 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 NR2F1P10589 423 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 ANXA11P50995 505 aaKnown RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 EPHA4P54764 986 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 C6orf132Q5T0Z8 1188 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 NKAIN2Q5VXU1 208 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 COL26A1Q96A83 441 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 ZNF300Q96RE9 604 aaPredicted RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 EPYCQ99645 322 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 TREX2Q9BQ50 279 aaPredicted RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 NPLQ9BXD5 320 aaPredicted RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 RSPO3Q9BXY4 272 aaPredicted RBP24.91■■□□□ 1.58
LDB1-202ENST00000425280 ANKHQ9HCJ1 492 aa24.91■■□□□ 1.58
LDB1-202ENST00000425280 H3BNH8 94 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 PDE9AO76083 593 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 H6PDO95479 791 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 CPMP14384 443 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 ALDH4A1P30038 563 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 RRM2P31350 389 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 DHPSP49366 369 aaPredicted RBP24.9■■□□□ 1.58
LDB1-202ENST00000425280 BNC1Q01954 994 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 EPS8Q12929 822 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 LYSMD4Q5XG99 296 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 OR7G2Q8NG99 324 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 OR9A4Q8NGU2 314 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 NCSTNQ92542 709 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 ZNF347Q96SE7 839 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 AMBRA1Q9C0C7 1298 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 FAM118AQ9NWS6 357 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 PDP1Q9P0J1 537 aaPredicted RBP24.9■■□□□ 1.58
LDB1-202ENST00000425280 SH3GLB1Q9Y371 365 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 PCDHGB3Q9Y5G1 929 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 CSNK1G3Q9Y6M4 447 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 TLCD2A6NGC4 264 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 FAM227AF5H4B4 570 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 RDH16O75452 317 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 TDGF1P13385 188 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 GABRA4P48169 554 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 ID2Q02363 134 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 FUT5Q11128 374 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 SRSF5Q13243 272 aaKnown RBP24.9■■□□□ 1.58
LDB1-202ENST00000425280 CYP4Z1Q86W10 505 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 GIMAP5Q96F15 307 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 RAB33BQ9H082 229 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 NTMQ9P121 344 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 EPHA6Q9UF33 1036 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 MYRFQ9Y2G1 1151 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 TESMINQ9Y4I5 508 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 SCN2AQ99250 2005 aa24.9■■□□□ 1.58
LDB1-202ENST00000425280 IGHV5-51A0A0C4DH38 117 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 EME2A4GXA9 379 aaPredicted RBP24.89■■□□□ 1.58
LDB1-202ENST00000425280 MED26O95402 600 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 PPP2R1BP30154 601 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 DAPP51397 102 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 WDR5BQ86VZ2 330 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 LGI4Q8N135 537 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 GPR32P1Q8NGA4 272 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 APOBEC4Q8WW27 367 aaKnown RBP24.89■■□□□ 1.58
LDB1-202ENST00000425280 RMND5BQ96G75 393 aaPredicted RBP24.89■■□□□ 1.58
LDB1-202ENST00000425280 ZNF607Q96SK3 696 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 EQTNQ9NQ60 294 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 PRMT8Q9NR22 394 aaPredicted RBP24.89■■□□□ 1.58
LDB1-202ENST00000425280 DNAAF2Q9NVR5 837 aaKnown RBP24.89■■□□□ 1.58
LDB1-202ENST00000425280 C3orf18Q9UK00 162 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 KCNE3Q9Y6H6 103 aa24.89■■□□□ 1.58
LDB1-202ENST00000425280 PCDH15Q96QU1 1955 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 FGF17O60258 216 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 LDB3O75112 727 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 GIMD1P0DJR0 217 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 PORP16435 677 aaPredicted RBP24.89■■□□□ 1.57
LDB1-202ENST00000425280 ITGA2P17301 1181 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 MLLT3P42568 568 aaPredicted RBP24.89■■□□□ 1.57
LDB1-202ENST00000425280 YAP1P46937 504 aaKnown RBP24.89■■□□□ 1.57
LDB1-202ENST00000425280 MAN2A2P49641 1150 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 RAB38P57729 211 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 KCNAB2Q13303 367 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 SHBQ15464 509 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 MUS81Q96NY9 551 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 OR7D2Q96RA2 312 aa24.89■■□□□ 1.57
LDB1-202ENST00000425280 ADAMDEC1O15204 470 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 SEC24DO94855 1032 aaPredicted RBP24.88■■□□□ 1.57
LDB1-202ENST00000425280 IGFBP5P24593 272 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 PIGAP37287 484 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 OR1D5P58170 312 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 PUM1Q14671 1186 aaKnown RBP eCLIP24.88■■□□□ 1.575e-6■□□□□ 10.2
LDB1-202ENST00000425280 RFX4Q33E94 735 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 KDM4DQ6B0I6 523 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms