RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SPRED3Q2MJR0 410 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 UNC50Q53HI1 259 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 SGO1Q5FBB7 561 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 PIGGQ5H8A4 983 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 ZNF678Q5SXM1 525 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 TTC19Q6DKK2 380 aaPredicted RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 OPN5Q6U736 354 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 LYPD8Q6UX82 237 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 MCEMP1Q8IX19 187 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 CCDC63Q8NA47 563 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 GOLM1Q8NBJ4 401 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 OR4F6Q8NGB9 312 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 NUBPLQ8TB37 319 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 ART5Q96L15 291 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 GAL3ST4Q96RP7 486 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 SMC6Q96SB8 1091 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 VKORC1Q9BQB6 163 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 C1QTNF3Q9BXJ4 246 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 MRPL1Q9BYD6 325 aaKnown RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 FARSBQ9NSD9 589 aaKnown RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 LIPGQ9Y5X9 500 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 ACOT7O00154 380 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 PGRMC2O15173 223 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 DYRK3O43781 588 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 CLDN14O95500 239 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 KLK1P06870 262 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 H2AFXP16104 143 aaPredicted RBP14.02□□□□□ -0.17
USB1-202ENST00000423271 CNR1P21554 472 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 PRKAA2P54646 552 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 BIKQ13323 160 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 GGTA1PQ4G0N0 100 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 TNFAIP8L3Q5GJ75 292 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 OR52E8Q6IFG1 317 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 LETMD1Q6P1Q0 360 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 FAM47EQ6ZV65 393 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 MILR1Q7Z6M3 343 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 CROCCP2Q86T23 111 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 SLC22A9Q8IVM8 553 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 MARVELD2Q8N4S9 558 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 C7orf57Q8NEG2 295 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 RDH11Q8TC12 318 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 SGCZQ96LD1 299 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 FAM173AQ9BQD7 235 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 PELOQ9BRX2 385 aaKnown RBP14.02□□□□□ -0.17
USB1-202ENST00000423271 WWTR1Q9GZV5 400 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 IQCGQ9H095 443 aaKnown RBP14.02□□□□□ -0.17
USB1-202ENST00000423271 ZDHHC11Q9H8X9 412 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 WDR41Q9HAD4 459 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 SACM1LQ9NTJ5 587 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 TUBA8Q9NY65 449 aaPredicted RBP14.02□□□□□ -0.17
USB1-202ENST00000423271 SLC17A7Q9P2U7 560 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 PLLPQ9Y342 182 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 AKAP9Q99996 3911 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 CSMD2Q7Z408 3487 aa14.02□□□□□ -0.17
USB1-202ENST00000423271 DCHS2Q6V1P9 2916 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 SUPT7LO94864 414 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 CELA3AP09093 270 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 CPA3P15088 417 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 IMPDH1P20839 514 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 SSTR4P31391 388 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 PIGAP37287 484 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 MAGEA5P43359 124 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 SLC37A1P57057 533 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 CLCQ05315 142 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 FOXO1Q12778 655 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 IFT88Q13099 833 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 EBPQ15125 230 aaKnown RBP14.01□□□□□ -0.17
USB1-202ENST00000423271 ZNF791Q3KP31 576 aaPredicted RBP14.01□□□□□ -0.17
USB1-202ENST00000423271 EMC4Q5J8M3 183 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 ARHGAP11AQ6P4F7 1023 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 GK5Q6ZS86 529 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 EXOC3L1Q86VI1 746 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 RPRMLQ8N4K4 120 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 TMEM251Q8N6I4 163 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 SLC22A8Q8TCC7 542 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 TCP10LQ8TDR4 215 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 RIT1Q92963 219 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 CCDC126Q96EE4 140 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 L3HYPDHQ96EM0 354 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 PGM2Q96G03 612 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 FAM111AQ96PZ2 611 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 HBEGFQ99075 208 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 ELOVL6Q9H5J4 265 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 SH2D2AQ9NP31 389 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 CHST11Q9NPF2 352 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 ARGLU1Q9NWB6 273 aaPredicted RBP14.01□□□□□ -0.17
USB1-202ENST00000423271 SENP1Q9P0U3 644 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 ZNF225Q9UK10 706 aa14.01□□□□□ -0.17
USB1-202ENST00000423271 TYROBPO43914 113 aa14□□□□□ -0.17
USB1-202ENST00000423271 LRATO95237 230 aa14□□□□□ -0.17
USB1-202ENST00000423271 OTCP00480 354 aa14□□□□□ -0.17
USB1-202ENST00000423271 PDYNP01213 254 aa14□□□□□ -0.17
USB1-202ENST00000423271 P04436 131 aa14□□□□□ -0.17
USB1-202ENST00000423271 CT62P0C5K7 136 aa14□□□□□ -0.17
USB1-202ENST00000423271 SLC35E2P0CK97 266 aa14□□□□□ -0.17
USB1-202ENST00000423271 COX6B1P14854 86 aa14□□□□□ -0.17
USB1-202ENST00000423271 PCLAFQ15004 111 aa14□□□□□ -0.17
USB1-202ENST00000423271 TCHHL1Q5QJ38 904 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms