RNA–Protein interactions for RNA: ENST00000423058.6

SCN1A-204, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN1A, Length 8,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-204ENST00000423058 LIN37Q96GY3 246 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 HERC2P3Q9BVR0 1158 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 UCKL1Q9NWZ5 548 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 ROBO1Q9Y6N7 1651 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DLGAP1O14490 977 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 PRKD3O94806 890 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SEMA4FO95754 770 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SEMG2Q02383 582 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 LY6G5CQ5SRR4 150 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 KIAA1614Q5VZ46 1190 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 TAAR8Q969N4 342 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 A0A1W2PP55 124 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CFHP08603 1231 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 PAX7P23759 505 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 HTR2AP28223 471 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 MAGEA8P43361 318 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 RGS6P49758 472 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 PCBD1P61457 104 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CSNK2A1P68400 391 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 HHEXQ03014 270 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 GALNT15Q8N3T1 639 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 FAM174AQ8TBP5 190 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CASTOR1Q8WTX7 329 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 RSC1A1Q92681 617 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 TMEM203Q969S6 136 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 FAM46BQ96A09 425 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 C12orf43Q96C57 262 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SPHK2Q9NRA0 654 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CLEC4EQ9ULY5 219 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 BCL9LQ86UU0 1499 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CLCA1A8K7I4 914 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CCL22O00626 93 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DNAJB5O75953 348 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CSF2P04141 144 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DRD2P14416 443 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CAPN3P20807 821 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 PRPH2P23942 346 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 ART1P52961 327 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CYCSP99999 105 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CYBRD1Q53TN4 286 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 AWAT2Q6E213 333 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 FBXL22Q6P050 247 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SLC27A4Q6P1M0 643 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 GSG1LQ6UXU4 331 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 ASB9Q96DX5 294 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CNN2Q99439 309 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 MCHR1Q99705 422 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 FAM117AQ9C073 453 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 BOKQ9UMX3 212 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 OARD1Q9Y530 152 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 MAB21L2Q9Y586 359 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 A6NIZ1 184 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SLC1A7O00341 560 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 NELFEP18615 380 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 RAP1BP61224 184 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 RAP1AP62834 184 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 ARL16Q0P5N6 197 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 FADDQ13158 208 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 EIF4HQ15056 248 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 RTL6Q6ICC9 239 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SHFQ7M4L6 423 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CCDC116Q8IYX3 515 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 OR11L1Q8NGX0 322 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 ECHDC3Q96DC8 303 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DAZAP1Q96EP5 407 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 AKTIPQ9H8T0 292 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 POPDC3Q9HBV1 291 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 CD207Q9UJ71 328 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 DLGAP4Q9Y2H0 992 aa6.57□□□□□ -1.36
SCN1A-204ENST00000423058 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-204ENST00000423058 H3BSH0 61 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 CDRT1O95170 752 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 C6orf47O95873 294 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 RAB8AP61006 207 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 GAS6Q14393 721 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 TSTQ16762 297 aaKnown RBP6.56□□□□□ -1.36
SCN1A-204ENST00000423058 AKR1C8PQ5T2L2 129 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 HAGHLQ6PII5 290 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-204ENST00000423058 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 ZNF431Q8TF32 576 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-204ENST00000423058 TBC1D20Q96BZ9 403 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 SACM1LQ9NTJ5 587 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 TAS2R3Q9NYW6 316 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 MGAT4CQ9UBM8 478 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 HS3ST4Q9Y661 456 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 NUP98P52948 1817 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 TGFB1I1O43294 461 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 SEC14L5O43304 696 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 RGS9O75916 674 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-204ENST00000423058 WDPCPO95876 746 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 EPOP01588 193 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 ACTBP60709 375 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 ACTG1P63261 375 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 TAP2Q03519 686 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 ABHD18Q0P651 414 aa6.56□□□□□ -1.36
SCN1A-204ENST00000423058 MOGQ16653 247 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms