RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PAOXQ6QHF9 649 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 GALNT12Q8IXK2 581 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 CCDC116Q8IYX3 515 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 AMER2Q8N7J2 671 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 TMEM102Q8N9M5 508 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-202ENST00000422991 MORN4Q8NDC4 146 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 B3GNT7Q8NFL0 401 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 OR9A2Q8NGT5 310 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 SLC2A12Q8TD20 617 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 ZNF675Q8TD23 568 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 ZBED6CLQ96FA7 236 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-202ENST00000422991 FBXL20Q96IG2 436 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 DUSP26Q9BV47 211 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 GLIPR2Q9H4G4 154 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 ACSS1Q9NUB1 689 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-202ENST00000422991 MAT2BQ9NZL9 334 aa15.85■□□□□ 0.13
COL7A1-202ENST00000422991 FAM234BA2RU67 622 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 HRKO00198 91 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 DYRK3O43781 588 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CELA2AP08217 269 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CT62P0C5K7 136 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 EFNA1P20827 205 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-202ENST00000422991 SOX18P35713 384 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 GPR143P51810 404 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 PGDP52209 483 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 WNT3P56703 355 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 MGAT2Q10469 447 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CHAF1BQ13112 559 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 AIMP2Q13155 320 aaKnown RBP15.84■□□□□ 0.13
COL7A1-202ENST00000422991 PRICKLE4Q2TBC4 344 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 BTBD16Q32M84 506 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 ZNF628Q5EBL2 1059 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 C6orf163Q5TEZ5 329 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 OR4F3Q6IEY1 312 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 PIGWQ7Z7B1 504 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 APLFQ8IW19 511 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CPSF7Q8N684 471 aaKnown RBP15.84■□□□□ 0.13
COL7A1-202ENST00000422991 NATD1Q8N6N6 113 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CLEC1AQ8NC01 280 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 APCDD1LQ8NCL9 501 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 ADCY4Q8NFM4 1077 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 ZFP28Q8NHY6 868 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 M1APQ8TC57 530 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CCT8L2Q96SF2 557 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 OR8D2Q9GZM6 311 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 TMEM45AQ9NWC5 275 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 KCNMB2Q9Y691 235 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 DOCK10Q96BY6 2186 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 CACNA1GO43497 2377 aa15.84■□□□□ 0.13
COL7A1-202ENST00000422991 SLITRK5O94991 958 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 FAM107AO95990 144 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 IGKV3-11P04433 115 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 SERPINA7P05543 415 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ICAM2P13598 275 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 S100A3P33764 101 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 POLR2JP52435 117 aaKnown RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 DGKQP52824 942 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 PHC1P78364 1004 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 MAP4K2Q12851 820 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 RCAN2Q14206 197 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF267Q14586 743 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 MLC1Q15049 377 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 FAM111BQ6SJ93 734 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF551Q7Z340 670 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 GPR155Q7Z3F1 870 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 MTERF4Q7Z6M4 381 aaKnown RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 FUNDC1Q8IVP5 155 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 VWA5B2Q8N398 1253 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF321PQ8N8H1 164 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 OR1N1Q8NGS0 311 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 DOK4Q8TEW6 326 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF721Q8TF20 911 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 NCLNQ969V3 563 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 CTHRC1Q96CG8 243 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 VMP1Q96GC9 406 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 SENP5Q96HI0 755 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ART5Q96L15 291 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 CNPPD1Q9BV87 410 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ING2Q9H160 280 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 MMP25Q9NPA2 562 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ATP13A2Q9NQ11 1180 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 SAR1AQ9NR31 198 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 MRGBPQ9NV56 204 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 FAM120CQ9NX05 1096 aaKnown RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF639Q9UID6 485 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF223Q9UK11 482 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-202ENST00000422991 ERVK-19Q9WJR5 959 aa15.83■□□□□ 0.12
COL7A1-202ENST00000422991 A0A1W2PRB8 838 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 RNASET2O00584 256 aaKnown RBP15.82■□□□□ 0.12
COL7A1-202ENST00000422991 SCN2BO60939 215 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 CLPSP04118 112 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 PGRP06401 933 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 IFI6P09912 130 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 S1PR1P21453 382 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 MANFP55145 182 aaKnown RBP15.82■□□□□ 0.12
COL7A1-202ENST00000422991 MRPS35P82673 323 aaKnown RBP15.82■□□□□ 0.12
COL7A1-202ENST00000422991 FUT7Q11130 342 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 HSPB3Q12988 150 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 AGKQ53H12 422 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms